Gene
RNA
| Item | Value |
|---|---|
| gene id | G715726 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 48181726 ~ 48182007 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU813404 | True | 282 | lncRNA | 0.48 | 1 | 48181726 | 48182007 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529987 | LOC106568679 | coding | downstream | 287550 | 47726790 ~ 47894176 (-) |
| LOC110529117 | NA | coding | downstream | 525658 | 47655052 ~ 47656068 (-) |
| LOC110529981 | LOC106568675 | coding | downstream | 741784 | 47397783 ~ 47439942 (-) |
| LOC110529978 | LOC106568670 | coding | downstream | 877807 | 47298295 ~ 47303919 (-) |
| LOC110529977 | LOC106568669 | coding | downstream | 886418 | 47283739 ~ 47295308 (-) |
| LOC110529989 | LOC106568683 | coding | upstream | 147677 | 48329684 ~ 48343010 (-) |
| dlg1l | LOC106568684 | coding | upstream | 173997 | 48356004 ~ 48616588 (-) |
| LOC118965521 | NA | coding | upstream | 349515 | 48531522 ~ 48536626 (-) |
| LOC110529994 | LOC106568693 | coding | upstream | 940042 | 49122049 ~ 49140712 (-) |
| LOC118965653 | NA | coding | upstream | 1214792 | 49396799 ~ 49396853 (-) |
| G715725 | NA | non-coding | downstream | 707 | 48180695 ~ 48181019 (-) |
| G715721 | NA | non-coding | downstream | 7495 | 48174013 ~ 48174231 (-) |
| G715715 | NA | non-coding | downstream | 12791 | 48167774 ~ 48168935 (-) |
| G715717 | NA | non-coding | downstream | 17501 | 48163730 ~ 48164225 (-) |
| G715625 | NA | non-coding | downstream | 61575 | 48119315 ~ 48120151 (-) |
| G715727 | NA | non-coding | upstream | 7 | 48182014 ~ 48182227 (-) |
| G715734 | NA | non-coding | upstream | 6481 | 48188488 ~ 48188712 (-) |
| G715758 | NA | non-coding | upstream | 24231 | 48206238 ~ 48206456 (-) |
| G715781 | NA | non-coding | upstream | 36919 | 48218926 ~ 48219180 (-) |
| G715783 | NA | non-coding | upstream | 37626 | 48219633 ~ 48219842 (-) |
| G714425 | LOC106568665 | other | downstream | 1002990 | 47178424 ~ 47178736 (-) |
| LOC110529973 | LOC106568664 | other | downstream | 1124066 | 47051073 ~ 47067973 (-) |
| crfb16 | LOC106568648 | other | downstream | 1856045 | 46309732 ~ 46325685 (-) |
| G712814 | NA | other | downstream | 2723478 | 45457777 ~ 45458248 (-) |
| G711133 | NA | other | downstream | 3642222 | 44538793 ~ 44539504 (-) |
| G715865 | NA | other | upstream | 106935 | 48288942 ~ 48289581 (-) |
| G716463 | LOC106591423 | other | upstream | 577905 | 48759912 ~ 48761163 (-) |
| G716480 | tnk2 | other | upstream | 600114 | 48782121 ~ 48782515 (-) |
| G716488 | NA | other | upstream | 606514 | 48788521 ~ 48788962 (-) |
