XLOC_026258 (aqp8b)


Basic Information

Item Value
gene id XLOC_026258
gene name aqp8b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 18572279 ~ 18575868 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051210
ATGACGAGCAAAGACCTCCGCGATATTAGAGCGCACACACTGCAGAGCCCACAGCAGCACACGATGGCAGATGACAAAATGGAGAAAGCGGCGATGGATAAAATGGTGCAGGAGACGGAGATGGAGGAGCCCGGGCTGTTTGAGCAGCTCGTCCAGCCGTGTATGGCGGAGCTGGTGGGCACCGCTTTCTTTGTGCTGATGGGCTGTTTGTGTGTGATCGAGAGCGCGCAGGAGGGGCACACACTGCAGGCCGCGCTCGTGCACGGGCTCGCGTTGGCGGTGGTCATTGGATGTATGGTGGAGATCAGTGGTTCACATTTCAATCCATCATTCACCATCGCCGTCTTCCTCAGTGGTGGCCTGGAGCTGAAAATGGTGTTGCCGTATTTGATCTCTCAGGTCTCTGGAGGTCTGCTTGGTGCAGTCATGGCCAAGGGAATGACATCTAGCGAGAAATATGCACAAGCTCAAGGTGCTGCATTTACAGTCCTCCAGGCTGATGATCACATTATGAAGGCGTTGTTTGCAGAAGCTGCTATGACGTGTCTGGCTACCTTGGCGGTATTATTGTCAGCGGTCAATGGCAAGAGCAAAAACCACATGTTTCCATTTCTGGTGGGCTGCACAGTCATGGTTAATGTGCTGGCAGGGGCCAATGTGTCTGGTGCTTGTCTGAATCCTGTAAGAGCTCTGGGTCCTGCCGTGCTGACCAACTACTGGACTCACCACTGGATCTACTGGGTGGGTCCCATCACCGGTGGACTCATTGCTGCTGCATTAGTCAGGCTTTTCCTAGGTGACAACGATACCCGTGTAGTGATGAAGTAAAAGTATGGGCTCACCTGTCAGAtggagttattttttttaattatctgtaTCTACTTGGTGCACAATTGATGTTATTTGTAAACTGTATAATGATTTGTGAATTTTTGTCATgtctaaataaaccaataaacaaataaaattttgaaTATAAaggatttttacatatttta

Function

symbol description
aqp8b Enables water transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in brain; intermediate mesoderm; pronephric proximal convoluted tubule; and pronephros. Orthologous to human AQP8 (aquaporin 8).

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0015250 water channel activity molecular_function
GO:0015267 channel activity molecular_function
GO:0005372 water transmembrane transporter activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080220-47 Enables water transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in brain; intermediate mesoderm; pronephric proximal convoluted tubule; and pronephros. Orthologous to human AQP8 (aquaporin 8).

Ensembl:

ensembl_id ENSDARG00000089749

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051210 True 998 mRNA 0.49 5 18572279 18575868

Neighbor

gene id symbol gene type direction distance location
XLOC_026257 NA coding downstream 107286 18461357 ~ 18464993 (-)
XLOC_026256 ndufb10 coding downstream 161311 18405136 ~ 18410968 (-)
XLOC_026255 kdelr2a coding downstream 187778 18376269 ~ 18384501 (-)
XLOC_026254 spag9a coding downstream 198675 18303407 ~ 18373604 (-)
XLOC_026252 NA coding downstream 280062 18109375 ~ 18292217 (-)
XLOC_026259 slc5a11 coding upstream 79805 18655673 ~ 18675688 (-)
XLOC_026260 grid2ipa coding upstream 99848 18675716 ~ 18711288 (-)
XLOC_026261 e4f1 coding upstream 138275 18714143 ~ 18737126 (-)
XLOC_026262 zgc:113333 coding upstream 165082 18740950 ~ 18756076 (-)
XLOC_026263 hagh coding upstream 198643 18774511 ~ 18792534 (-)
XLOC_026249 NA non-coding downstream 628044 17943289 ~ 17944235 (-)
XLOC_026246 NA non-coding downstream 968130 17602486 ~ 17604149 (-)
XLOC_026245 BX470185.2 non-coding downstream 1668999 16900243 ~ 16903280 (-)
XLOC_026265 CU151886.3 non-coding upstream 396540 18972408 ~ 18974640 (-)
XLOC_026268 BX546473.1 non-coding upstream 631366 19207234 ~ 19216723 (-)
XLOC_026269 BX322663.2 non-coding upstream 757636 19333504 ~ 19333631 (-)
XLOC_026274 BX572620.1 non-coding upstream 1237380 19813248 ~ 19820807 (-)
XLOC_026276 NA non-coding upstream 1395813 19971681 ~ 19973620 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000034_04823597_04824920 NA coding CI01000034 null 4823321 ~ 4825135 (-)