Item | Value |
---|---|
gene id | G715789 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 48221706 ~ 48230202 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
Transposable element Tcb1 transposase, partial |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU813477 | False | 3416 | lncRNA | 0.36 | 2 | 48221706 | 48230202 |
TU813478 | False | 3416 | lncRNA | 0.36 | 2 | 48221706 | 48230202 |
TU813479 | False | 3416 | lncRNA | 0.36 | 2 | 48221706 | 48230202 |
TU813480 | False | 3416 | lncRNA | 0.36 | 2 | 48221706 | 48230202 |
TU813481 | True | 3416 | lncRNA | 0.36 | 2 | 48221706 | 48230202 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110529987 | LOC106568679 | coding | downstream | 327530 | 47726790 ~ 47894176 (-) |
LOC110529117 | NA | coding | downstream | 565638 | 47655052 ~ 47656068 (-) |
LOC110529981 | LOC106568675 | coding | downstream | 781764 | 47397783 ~ 47439942 (-) |
LOC110529978 | LOC106568670 | coding | downstream | 917787 | 47298295 ~ 47303919 (-) |
LOC110529977 | LOC106568669 | coding | downstream | 926398 | 47283739 ~ 47295308 (-) |
LOC110529989 | LOC106568683 | coding | upstream | 99482 | 48329684 ~ 48343010 (-) |
dlg1l | LOC106568684 | coding | upstream | 125802 | 48356004 ~ 48616588 (-) |
LOC118965521 | NA | coding | upstream | 301320 | 48531522 ~ 48536626 (-) |
LOC110529994 | LOC106568693 | coding | upstream | 891847 | 49122049 ~ 49140712 (-) |
LOC118965653 | NA | coding | upstream | 1166597 | 49396799 ~ 49396853 (-) |
G715783 | NA | non-coding | downstream | 1864 | 48219633 ~ 48219842 (-) |
G715781 | NA | non-coding | downstream | 2526 | 48218926 ~ 48219180 (-) |
G715758 | NA | non-coding | downstream | 15250 | 48206238 ~ 48206456 (-) |
G715734 | NA | non-coding | downstream | 32994 | 48188488 ~ 48188712 (-) |
G715727 | NA | non-coding | downstream | 39479 | 48182014 ~ 48182227 (-) |
G715824 | NA | non-coding | upstream | 27520 | 48257722 ~ 48258017 (-) |
G715860 | NA | non-coding | upstream | 55689 | 48285891 ~ 48286307 (-) |
G715862 | NA | non-coding | upstream | 56830 | 48287032 ~ 48287824 (-) |
G716253 | NA | non-coding | upstream | 68363 | 48298565 ~ 48298788 (-) |
G716261 | NA | non-coding | upstream | 77984 | 48308186 ~ 48308467 (-) |
G714425 | LOC106568665 | other | downstream | 1042970 | 47178424 ~ 47178736 (-) |
LOC110529973 | LOC106568664 | other | downstream | 1164046 | 47051073 ~ 47067973 (-) |
crfb16 | LOC106568648 | other | downstream | 1896025 | 46309732 ~ 46325685 (-) |
G712814 | NA | other | downstream | 2763458 | 45457777 ~ 45458248 (-) |
G711133 | NA | other | downstream | 3682202 | 44538793 ~ 44539504 (-) |
G715865 | NA | other | upstream | 58740 | 48288942 ~ 48289581 (-) |
G716463 | LOC106591423 | other | upstream | 529710 | 48759912 ~ 48761163 (-) |
G716480 | tnk2 | other | upstream | 551919 | 48782121 ~ 48782515 (-) |
G716488 | NA | other | upstream | 558319 | 48788521 ~ 48788962 (-) |