G715864


Basic Information

Item Value
gene id G715864
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 48289121 ~ 48289659 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU813563
ccaggagaggatagaattactagaccaattaatggaaggattatgacaaactagccagggatggcccaaaacaacaggtgtaaaaggtgaacgaaaaattaaaaaagaaatggtttcactatgattaccagaaacagtgagggttaagggtagcgtctcacgctgaatcctggggagaggactaccatccagggcgaacaaggccgtgggctcctttaactgtctgagaggaatgtcatgttcccgagcccaggtctcgtccataaaacagccctccgccccagagtctattaaggcactgcaggaagctgacgaaccggtccagcgtagatggaccgacaaggtagtgcaggatcttgaaggagagacaggagtagtagcgctcaccagtagccctccgcttactgacgagctctggccttttactggacatgaagtgacaaaatgaccagcggaaccgcaatagagacagaggcggttggtgattctccgttccctctccttagtcgagatgcggatacctcccagctgcatgggct

Function

NR:

description
Pol polyprotein

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU813563 True 539 lncRNA 0.51 1 48289121 48289659

Neighbor

gene id symbol gene type direction distance location
si:dkey-181m9.8 LOC106568680 coding upstream 126575 48145790 ~ 48162546 (+)
LOC110529986 LOC106568678 coding upstream 782887 47468480 ~ 47506234 (+)
si:dkey-154p10.3 LOC106568677 coding upstream 836585 47440133 ~ 47452536 (+)
ccr9a ccr9 coding upstream 908147 47347501 ~ 47380974 (+)
LOC110529979 NA coding upstream 990840 47296663 ~ 47298281 (+)
tnk2b tnk2 coding downstream 389154 48678813 ~ 48806257 (+)
LOC110530923 LOC106568690 coding downstream 613278 48902937 ~ 48931678 (+)
adipoqb LOC100653481 coding downstream 828068 49117727 ~ 49120309 (+)
LOC110529995 LOC106568692 coding downstream 858308 49147967 ~ 49198179 (+)
LOC110530924 LOC106568797 coding downstream 917340 49206999 ~ 49209154 (+)
G715861 NA non-coding upstream 1280 48287157 ~ 48287841 (+)
G715859 NA non-coding upstream 3845 48285045 ~ 48285276 (+)
G715829 NA non-coding upstream 9217 48261500 ~ 48279904 (+)
G715823 NA non-coding upstream 31104 48257616 ~ 48258017 (+)
G715822 NA non-coding upstream 32187 48256727 ~ 48256934 (+)
G715866 NA non-coding downstream 2687 48292346 ~ 48292589 (+)
G715870 NA non-coding downstream 7368 48297027 ~ 48297375 (+)
G715874 NA non-coding downstream 14510 48304169 ~ 48304376 (+)
G715904 NA non-coding downstream 65323 48354982 ~ 48355448 (+)
G716074 NA non-coding downstream 287974 48577633 ~ 48579048 (+)
G713574 NA other upstream 1519875 46715915 ~ 46769246 (+)
G713405 NA other upstream 1822894 46465398 ~ 46466227 (+)
G711912 NA other upstream 2494572 45793269 ~ 45794549 (+)
G711845 NA other upstream 2641744 45646857 ~ 45647377 (+)
G711021 NA other upstream 3840148 44448584 ~ 44448973 (+)
G716035 LOC106581475 other downstream 248084 48537743 ~ 48544164 (+)
G716133 NA other downstream 470684 48760343 ~ 48760740 (+)
G716862 NA other downstream 1043182 49332841 ~ 49333772 (+)
G716993 LOC100136012 other downstream 1256553 49546212 ~ 49547085 (+)
LOC118965615 NA other downstream 1563728 49853027 ~ 49854435 (+)

Expression


Co-expression Network