G715870


Basic Information

Item Value
gene id G715870
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 48297027 ~ 48297375 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU813569
taacgcaacgttaactattcatgaaaatcgcaaatgaaattaaataaatatattcactcacaagcttagccttttgttaacaacactgtcatctcagattttctaaatatgcttttcaaccatagctacacaaccAAGCCTGCATTCATGTCTTGTGCACCAGaggcatggaatagtctacaatccatgcttcatttagacatgttagtgccactgaatgaatTTACGTTTTTgatgggagactctgttacagaggagtgtaaatgcttattttaggctggatcatgttgttgaattgtattgtattgtCGTAAGTTTTAATTCTCTAatatattgattgttgctgcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU813569 True 349 lncRNA 0.35 1 48297027 48297375

Neighbor

gene id symbol gene type direction distance location
si:dkey-181m9.8 LOC106568680 coding upstream 134481 48145790 ~ 48162546 (+)
LOC110529986 LOC106568678 coding upstream 790793 47468480 ~ 47506234 (+)
si:dkey-154p10.3 LOC106568677 coding upstream 844491 47440133 ~ 47452536 (+)
ccr9a ccr9 coding upstream 916053 47347501 ~ 47380974 (+)
LOC110529979 NA coding upstream 998746 47296663 ~ 47298281 (+)
tnk2b tnk2 coding downstream 381438 48678813 ~ 48806257 (+)
LOC110530923 LOC106568690 coding downstream 605562 48902937 ~ 48931678 (+)
adipoqb LOC100653481 coding downstream 820352 49117727 ~ 49120309 (+)
LOC110529995 LOC106568692 coding downstream 850592 49147967 ~ 49198179 (+)
LOC110530924 LOC106568797 coding downstream 909624 49206999 ~ 49209154 (+)
G715866 NA non-coding upstream 4438 48292346 ~ 48292589 (+)
G715864 NA non-coding upstream 7368 48289121 ~ 48289659 (+)
G715861 NA non-coding upstream 9186 48287157 ~ 48287841 (+)
G715859 NA non-coding upstream 11751 48285045 ~ 48285276 (+)
G715829 NA non-coding upstream 17123 48261500 ~ 48279904 (+)
G715874 NA non-coding downstream 6794 48304169 ~ 48304376 (+)
G715904 NA non-coding downstream 57607 48354982 ~ 48355448 (+)
G716074 NA non-coding downstream 280258 48577633 ~ 48579048 (+)
G716171 NA non-coding downstream 456145 48753520 ~ 48753809 (+)
G716172 NA non-coding downstream 456488 48753863 ~ 48754086 (+)
G713574 NA other upstream 1527781 46715915 ~ 46769246 (+)
G713405 NA other upstream 1830800 46465398 ~ 46466227 (+)
G711912 NA other upstream 2502478 45793269 ~ 45794549 (+)
G711845 NA other upstream 2649650 45646857 ~ 45647377 (+)
G711021 NA other upstream 3848054 44448584 ~ 44448973 (+)
G716035 LOC106581475 other downstream 240368 48537743 ~ 48544164 (+)
G716133 NA other downstream 462968 48760343 ~ 48760740 (+)
G716862 NA other downstream 1035466 49332841 ~ 49333772 (+)
G716993 LOC100136012 other downstream 1248837 49546212 ~ 49547085 (+)
LOC118965615 NA other downstream 1556012 49853027 ~ 49854435 (+)

Expression


Co-expression Network