G715904


Basic Information

Item Value
gene id G715904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 48354982 ~ 48355448 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU813603
gagaaatgaacattcactTCCCTGGCAACAGctcgtggacattcctgcaatcagcatgccaaatgcacactccctcaaaacttgagatctgtaacattgtgttgtgtgaccaaactgcacatttcagtgaccttttattgcccccagcacaaggtgcacctgcgtaatgatcatgctgtttaatcagcttcttgatatgccacacctgtcaggtggatggattatctttgcaaaggagaaatgctcactaacagggatgtgaacaaaATTGGAGGgaaataagcttttgtgcatatggaacatttctgggatcttttatttcagctcatgatacATGGGACCAAagctttacatgttgtgtttatatttttgttcagtataccttTTCCATACATTCCGTAATCAATTTTAAATATTTCACCTATcctaaaaaatgtctaaaaaatatatatttgatgtcCCCCCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU813603 True 467 lncRNA 0.39 1 48354982 48355448

Neighbor

gene id symbol gene type direction distance location
si:dkey-181m9.8 LOC106568680 coding upstream 192436 48145790 ~ 48162546 (+)
LOC110529986 LOC106568678 coding upstream 848748 47468480 ~ 47506234 (+)
si:dkey-154p10.3 LOC106568677 coding upstream 902446 47440133 ~ 47452536 (+)
ccr9a ccr9 coding upstream 974008 47347501 ~ 47380974 (+)
LOC110529979 NA coding upstream 1056701 47296663 ~ 47298281 (+)
tnk2b tnk2 coding downstream 323365 48678813 ~ 48806257 (+)
LOC110530923 LOC106568690 coding downstream 547489 48902937 ~ 48931678 (+)
adipoqb LOC100653481 coding downstream 762279 49117727 ~ 49120309 (+)
LOC110529995 LOC106568692 coding downstream 792519 49147967 ~ 49198179 (+)
LOC110530924 LOC106568797 coding downstream 851551 49206999 ~ 49209154 (+)
G715874 NA non-coding upstream 50606 48304169 ~ 48304376 (+)
G715870 NA non-coding upstream 57607 48297027 ~ 48297375 (+)
G715866 NA non-coding upstream 62393 48292346 ~ 48292589 (+)
G715864 NA non-coding upstream 65323 48289121 ~ 48289659 (+)
G715861 NA non-coding upstream 67141 48287157 ~ 48287841 (+)
G716074 NA non-coding downstream 222185 48577633 ~ 48579048 (+)
G716171 NA non-coding downstream 398072 48753520 ~ 48753809 (+)
G716172 NA non-coding downstream 398415 48753863 ~ 48754086 (+)
G716177 NA non-coding downstream 404017 48759465 ~ 48759681 (+)
G716191 NA non-coding downstream 424179 48779627 ~ 48779932 (+)
G713574 NA other upstream 1585736 46715915 ~ 46769246 (+)
G713405 NA other upstream 1888755 46465398 ~ 46466227 (+)
G711912 NA other upstream 2560433 45793269 ~ 45794549 (+)
G711845 NA other upstream 2707605 45646857 ~ 45647377 (+)
G711021 NA other upstream 3906009 44448584 ~ 44448973 (+)
G716035 LOC106581475 other downstream 182295 48537743 ~ 48544164 (+)
G716133 NA other downstream 404895 48760343 ~ 48760740 (+)
G716862 NA other downstream 977393 49332841 ~ 49333772 (+)
G716993 LOC100136012 other downstream 1190764 49546212 ~ 49547085 (+)
LOC118965615 NA other downstream 1497939 49853027 ~ 49854435 (+)

Expression


Co-expression Network