G716074



Basic Information


Item Value
gene id G716074
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 48577633 ~ 48579048 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU813779
tttAGCAGCgtaagtgaaggaggctttgttgtgaaataggaagccgattctagatttaatttaggattggagattcttaatgtgagtctggaagaatttacagtctaaccagacacctacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcatttttttgtgaagaatcaacaagtgggacacaatcatgaagtggaacgacatttactggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcggactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacattttgcattgttgccaaaaagttacattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtgtcgtggcaaactttaaatgacactttttatggatatctttaagaaatggctttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatatgatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaagcttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggacttgattacacacag

Function


NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU813779 True 1389 lncRNA 0.43 2 48577633 48579048

Neighbor


gene id symbol gene type direction distance location
si:dkey-181m9.8 LOC106568680 coding upstream 415087 48145790 ~ 48162546 (+)
LOC110529986 LOC106568678 coding upstream 1071399 47468480 ~ 47506234 (+)
si:dkey-154p10.3 LOC106568677 coding upstream 1125097 47440133 ~ 47452536 (+)
ccr9a ccr9 coding upstream 1196659 47347501 ~ 47380974 (+)
LOC110529979 NA coding upstream 1279352 47296663 ~ 47298281 (+)
tnk2b tnk2 coding downstream 99765 48678813 ~ 48806257 (+)
LOC110530923 LOC106568690 coding downstream 323889 48902937 ~ 48931678 (+)
adipoqb LOC100653481 coding downstream 538679 49117727 ~ 49120309 (+)
LOC110529995 LOC106568692 coding downstream 568919 49147967 ~ 49198179 (+)
LOC110530924 LOC106568797 coding downstream 627951 49206999 ~ 49209154 (+)
G715904 NA non-coding upstream 222185 48354982 ~ 48355448 (+)
G715874 NA non-coding upstream 273257 48304169 ~ 48304376 (+)
G715870 NA non-coding upstream 280258 48297027 ~ 48297375 (+)
G715866 NA non-coding upstream 285044 48292346 ~ 48292589 (+)
G715864 NA non-coding upstream 287974 48289121 ~ 48289659 (+)
G716171 NA non-coding downstream 174472 48753520 ~ 48753809 (+)
G716172 NA non-coding downstream 174815 48753863 ~ 48754086 (+)
G716177 NA non-coding downstream 180417 48759465 ~ 48759681 (+)
G716191 NA non-coding downstream 200579 48779627 ~ 48779932 (+)
G716035 LOC106581475 other upstream 33469 48537743 ~ 48544164 (+)
G713574 NA other upstream 1808387 46715915 ~ 46769246 (+)
G713405 NA other upstream 2111406 46465398 ~ 46466227 (+)
G711912 NA other upstream 2783084 45793269 ~ 45794549 (+)
G711845 NA other upstream 2930256 45646857 ~ 45647377 (+)
G716133 NA other downstream 181295 48760343 ~ 48760740 (+)
G716862 NA other downstream 753793 49332841 ~ 49333772 (+)
G716993 LOC100136012 other downstream 967164 49546212 ~ 49547085 (+)
LOC118965615 NA other downstream 1274339 49853027 ~ 49854435 (+)
LOC110530019 LOC106568718 other downstream 1806498 50384296 ~ 50397007 (+)

Expression



Co-expression Network