G716171


Basic Information

Item Value
gene id G716171
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 48753520 ~ 48753809 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU813885
aggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtattatgctgaatgcaggaatgtccaccagagctgtttccagaaaatgtaatgttaatttctctaacataagctgcctccaacatcgttttagagaatttggcaatacgtccaaccggtctcacaactgcacaccatgtgtaaccacaccagcccaggacctccacatccggcttctgcacctgcgggatcgtcagaTGTGGGAGGACgaggtgctgaggagtatttctgtctgtaataaggccct

Function

NR:

description
NEDD8-conjugating enzyme UBE2F-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU813885 True 290 lncRNA 0.49 1 48753520 48753809

Neighbor

gene id symbol gene type direction distance location
si:dkey-181m9.8 LOC106568680 coding upstream 590974 48145790 ~ 48162546 (+)
LOC110529986 LOC106568678 coding upstream 1247286 47468480 ~ 47506234 (+)
si:dkey-154p10.3 LOC106568677 coding upstream 1300984 47440133 ~ 47452536 (+)
ccr9a ccr9 coding upstream 1372546 47347501 ~ 47380974 (+)
LOC110529979 NA coding upstream 1455239 47296663 ~ 47298281 (+)
LOC110530923 LOC106568690 coding downstream 149128 48902937 ~ 48931678 (+)
adipoqb LOC100653481 coding downstream 363918 49117727 ~ 49120309 (+)
LOC110529995 LOC106568692 coding downstream 394158 49147967 ~ 49198179 (+)
LOC110530924 LOC106568797 coding downstream 453190 49206999 ~ 49209154 (+)
gpr158b LOC106568695 coding downstream 525040 49278849 ~ 49381386 (+)
G716074 NA non-coding upstream 174472 48577633 ~ 48579048 (+)
G715904 NA non-coding upstream 398072 48354982 ~ 48355448 (+)
G715874 NA non-coding upstream 449144 48304169 ~ 48304376 (+)
G715870 NA non-coding upstream 456145 48297027 ~ 48297375 (+)
G715866 NA non-coding upstream 460931 48292346 ~ 48292589 (+)
G716172 NA non-coding downstream 54 48753863 ~ 48754086 (+)
G716177 NA non-coding downstream 5656 48759465 ~ 48759681 (+)
G716191 NA non-coding downstream 25818 48779627 ~ 48779932 (+)
tnk2b tnk2 non-coding downstream 46760 48678813 ~ 48806257 (+)
G716199 NA non-coding downstream 56306 48810115 ~ 48810348 (+)
G716035 LOC106581475 other upstream 209356 48537743 ~ 48544164 (+)
G713574 NA other upstream 1984274 46715915 ~ 46769246 (+)
G713405 NA other upstream 2287293 46465398 ~ 46466227 (+)
G711912 NA other upstream 2958971 45793269 ~ 45794549 (+)
G711845 NA other upstream 3106143 45646857 ~ 45647377 (+)
G716133 NA other downstream 6534 48760343 ~ 48760740 (+)
G716862 NA other downstream 579032 49332841 ~ 49333772 (+)
G716993 LOC100136012 other downstream 792403 49546212 ~ 49547085 (+)
LOC118965615 NA other downstream 1099578 49853027 ~ 49854435 (+)
LOC110530019 LOC106568718 other downstream 1631737 50384296 ~ 50397007 (+)

Expression


Co-expression Network