G716172


Basic Information

Item Value
gene id G716172
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 48753863 ~ 48754086 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU813886
gtattaaaCCATGGCTAGCAGAGTACCATAATGAGTCAATCTTAAGACTAAAGCTTTTTTGTACGTTTAAATCTAAGGATACTTCAGCTAGTATAAGGGACTGCAGATTACATTTGGCTATGTAGCTAAAACTGGTGAAATGTTTGTACATGGTCCCTGTCgaataaacaaataaaacaaataactTCTCCCTCTAGTTAGCATTCGAATGGTAACAATATTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU813886 True 224 lncRNA 0.34 1 48753863 48754086

Neighbor

gene id symbol gene type direction distance location
si:dkey-181m9.8 LOC106568680 coding upstream 591317 48145790 ~ 48162546 (+)
LOC110529986 LOC106568678 coding upstream 1247629 47468480 ~ 47506234 (+)
si:dkey-154p10.3 LOC106568677 coding upstream 1301327 47440133 ~ 47452536 (+)
ccr9a ccr9 coding upstream 1372889 47347501 ~ 47380974 (+)
LOC110529979 NA coding upstream 1455582 47296663 ~ 47298281 (+)
LOC110530923 LOC106568690 coding downstream 148851 48902937 ~ 48931678 (+)
adipoqb LOC100653481 coding downstream 363641 49117727 ~ 49120309 (+)
LOC110529995 LOC106568692 coding downstream 393881 49147967 ~ 49198179 (+)
LOC110530924 LOC106568797 coding downstream 452913 49206999 ~ 49209154 (+)
gpr158b LOC106568695 coding downstream 524763 49278849 ~ 49381386 (+)
G716171 NA non-coding upstream 54 48753520 ~ 48753809 (+)
G716074 NA non-coding upstream 174815 48577633 ~ 48579048 (+)
G715904 NA non-coding upstream 398415 48354982 ~ 48355448 (+)
G715874 NA non-coding upstream 449487 48304169 ~ 48304376 (+)
G715870 NA non-coding upstream 456488 48297027 ~ 48297375 (+)
G716177 NA non-coding downstream 5379 48759465 ~ 48759681 (+)
G716191 NA non-coding downstream 25541 48779627 ~ 48779932 (+)
tnk2b tnk2 non-coding downstream 46483 48678813 ~ 48806257 (+)
G716199 NA non-coding downstream 56029 48810115 ~ 48810348 (+)
G716205 NA non-coding downstream 63679 48817765 ~ 48818179 (+)
G716035 LOC106581475 other upstream 209699 48537743 ~ 48544164 (+)
G713574 NA other upstream 1984617 46715915 ~ 46769246 (+)
G713405 NA other upstream 2287636 46465398 ~ 46466227 (+)
G711912 NA other upstream 2959314 45793269 ~ 45794549 (+)
G711845 NA other upstream 3106486 45646857 ~ 45647377 (+)
G716133 NA other downstream 6257 48760343 ~ 48760740 (+)
G716862 NA other downstream 578755 49332841 ~ 49333772 (+)
G716993 LOC100136012 other downstream 792126 49546212 ~ 49547085 (+)
LOC118965615 NA other downstream 1099301 49853027 ~ 49854435 (+)
LOC110530019 LOC106568718 other downstream 1631460 50384296 ~ 50397007 (+)

Expression


Co-expression Network