G716177


Basic Information

Item Value
gene id G716177
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 48759465 ~ 48759681 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU813891
ttttgctcaccgttcttgtgatcattttgaccccacggggtgagatcttgcgtggagccccagatcgagggagattatcagtggtcttattATGTATgtattccatttcctaataattgctcccacagttgatttcttcaaaacaagctgcttacttattgcagattcagtcttcccagcttggtgcaggtctacaattttgtttctggtgtccttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU813891 True 217 lncRNA 0.43 1 48759465 48759681

Neighbor

gene id symbol gene type direction distance location
si:dkey-181m9.8 LOC106568680 coding upstream 596919 48145790 ~ 48162546 (+)
LOC110529986 LOC106568678 coding upstream 1253231 47468480 ~ 47506234 (+)
si:dkey-154p10.3 LOC106568677 coding upstream 1306929 47440133 ~ 47452536 (+)
ccr9a ccr9 coding upstream 1378491 47347501 ~ 47380974 (+)
LOC110529979 NA coding upstream 1461184 47296663 ~ 47298281 (+)
LOC110530923 LOC106568690 coding downstream 143256 48902937 ~ 48931678 (+)
adipoqb LOC100653481 coding downstream 358046 49117727 ~ 49120309 (+)
LOC110529995 LOC106568692 coding downstream 388286 49147967 ~ 49198179 (+)
LOC110530924 LOC106568797 coding downstream 447318 49206999 ~ 49209154 (+)
gpr158b LOC106568695 coding downstream 519168 49278849 ~ 49381386 (+)
G716172 NA non-coding upstream 5379 48753863 ~ 48754086 (+)
G716171 NA non-coding upstream 5656 48753520 ~ 48753809 (+)
G716074 NA non-coding upstream 180417 48577633 ~ 48579048 (+)
G715904 NA non-coding upstream 404017 48354982 ~ 48355448 (+)
G715874 NA non-coding upstream 455089 48304169 ~ 48304376 (+)
G716191 NA non-coding downstream 19946 48779627 ~ 48779932 (+)
tnk2b tnk2 non-coding downstream 40888 48678813 ~ 48806257 (+)
G716199 NA non-coding downstream 50434 48810115 ~ 48810348 (+)
G716205 NA non-coding downstream 58084 48817765 ~ 48818179 (+)
G716216 NA non-coding downstream 77037 48836718 ~ 48836945 (+)
G716035 LOC106581475 other upstream 215301 48537743 ~ 48544164 (+)
G713574 NA other upstream 1990219 46715915 ~ 46769246 (+)
G713405 NA other upstream 2293238 46465398 ~ 46466227 (+)
G711912 NA other upstream 2964916 45793269 ~ 45794549 (+)
G711845 NA other upstream 3112088 45646857 ~ 45647377 (+)
G716133 NA other downstream 662 48760343 ~ 48760740 (+)
G716862 NA other downstream 573160 49332841 ~ 49333772 (+)
G716993 LOC100136012 other downstream 786531 49546212 ~ 49547085 (+)
LOC118965615 NA other downstream 1093706 49853027 ~ 49854435 (+)
LOC110530019 LOC106568718 other downstream 1625865 50384296 ~ 50397007 (+)

Expression


Co-expression Network