G716496


Basic Information

Item Value
gene id G716496
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 48803552 ~ 48806253 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU814237
GTCAGCATTAACTTGCATTTGCCCTCTTGCACAATTCCGAACACCCAGGGGGGAAATCTACTGTACAGCCATGTGAAAATACATTGGTACAGGTAAGTCGGATTGAACTAACAAACCAACAAAAAGGTAATACAaccataaaacatttaaaaaacatgaacAGGAGAACATTAATTTGGGTAATAATACCACAAGGTCGCTTCAGTCCTTCTACAACTACAGCAGCTTGGTATCAAATATATCAACGGTGTAAGACATGGGGACATGGAACTACAACATGGATTTTGATGTATATCAAGGAGTTCACAGCAATGGAAGCATTCTCTTTTTGTCACGGCTGGATGGCCTTGACTGTTTGGAAGAGGATCATTATTATTGCGTTCAGAAAGTTCTACAATGGCTGTGTTCCAAACCAAGAACATGTACCCTTTACTGCAGCCCTTTGAGGATTGGCTTGTATAAATCTTTACGGGAGGATAGGTAAGACAGATCGCCTCACTCTATTAataacctcttggtgttagggggcagtattttcatttttggaaaaaatacgttcccgttttaaacgggatattttgtcaggaaaagatgctagaatatgcatataattgacagctttggatagaaaacactctaacgtttccaaaactgtaaagatattgtctgtgagtataacagaactgatgttgcaggtgaaagcctgagaaaaatccagtccggaagtgccccaggttttgaaagcgctgcgttccaatgactccctatatggctgtgaatgtaccatcaacgagtttacgctttctacgtattccccaaggtgtctacagcattgtgacgtagttttacgcatttctgttgaagaatagccgtatgggggcacattgcgtaagtggtcacatggtggctccaaGAGAGATTCTCGGGTAAAgtgcagaggtagccattactccaatcggttctagagaaaaaggaattgtcccgacggatatattatcgaatagatattagaaaaacaccttgaggatggattctaaacagagtttgccatgtttctgtcgatattatggagctaatttgaaatatttttcggcgttgtggtgaccgcaatttccgggcgatttctcagccaaacgtggaGAACAAACGGAGTGATTTCGcctaaaaaataatattttgggaaaaaatgaactttggctgtctacctgggagtctcgtgagtgaaaacatccgaagttcatcaaaggtaaacgatttaatttgattgcttttctgatttccgtgacaagtttgcctgctgctagcaaggcataatgccatgctaggctatgataaacttacacaaatgcttgtctagcgttggctgtaaagcatattttgaaaatctaagatgacagggtgattaacaaaaggctaagctgtgttccaatatatttcacttgtgattttcatgaataggaatattttcaaggaagatttatgtccgttgcgttatgctaattagtgtcagatgatgataacggtcccgttcacgggttGGGCGTCACTACAGGTTAAATCCTGCAATAGGCTATGGGGCGTACTGTCAAATTGATTTAACACATCCAGACCTTATCTGCGAGGGCAAACGACTGAAAGAACAGGGCAAAAAGACAAAGTTTGAGTTTGTAACACGAGCAAAGTGTTTATGAGACAGTACACTGTGTTCACAAACAGACACTGGAGAATGTCTAGACAGTCTgtttcacacacagagacaggcacaAACCCAGTCAAACGTCCAAATTGGTAGTGACTACAGAAAGACTGGGGAAAGACCAGCCTGCAAGCCCGCTACACTGGTAGGTGTGGTCTACTTGGAGTCTGCCAGTTTAACCGTGTTGGTCTGTGCTGGAATTTTAACTGATTTGAGTTCAGTTTTCAGGCCTTCTCAGGTAAGACTTATTTACATATTGGAATCAACTATAAAAGATCTTAATGTTCAAAAACATAATTTGAATCATAACACACGGAAAACAGCAGGTTGCGTGCAACCATTGCAGAATAGCTGCTCCACTGGTCTATGATGAATATAGAGGATAGCACAGTATAGAAAATACATCGAAAACAGACACTCACATTTTACATTACAGTTTGTTCTAGGTTTTGAGAGGTCTGCATACTTTATTGGCCGAGTCTAATCCAGTATTGTGACATTTTGGATCTTGCATGTGCTTGATGTGAGTAACCAACTAGGGCCAGTACTGAAATTTCTTCCCCTCAAAATTCTCTGCAACCTATGGGTGCTGACTAAAGGTTTTAGCTCCTAATAGTTGAGGTAAAGACTAGTTACTAGGGGTATTGTCTCTGCTCGGGAAATCTTTGTCCTGGAGCACTGGCAACGTTCTTAATTAATTATTTAAGTATCAATGTGCTTTGAAAATAAGCAAGCCAGTGGGCCATTTTCAATAGTAGTTTTGTGTGGGAAAAGTACTTAGAGTAGATAGTGAGGGAGCACAAAAAAAGAGTCAGGTGTCAAATTGTTCTGTTCACCAGTAGGGAACGATTAAATGGACATTTGGGTGGATCAAATTAATAGTACTTAGAGCCACAAGTGAACTCAATTCAGGGTGAGCACATTCTAACAAACAGCTTAACtgatcaaaataaaataaaacatctcaaGAGAGTTGAACATTTTCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU814237 True 2682 lncRNA 0.40 2 48803552 48806253
Loading

Neighbor

gene id symbol gene type direction distance location
dlg1l LOC106568684 coding downstream 186964 48356004 ~ 48616588 (-)
LOC118965521 NA coding downstream 266926 48531522 ~ 48536626 (-)
LOC110529989 LOC106568683 coding downstream 460542 48329684 ~ 48343010 (-)
LOC110529987 LOC106568679 coding downstream 909376 47726790 ~ 47894176 (-)
LOC110529117 NA coding downstream 1147484 47655052 ~ 47656068 (-)
LOC110529994 LOC106568693 coding upstream 315796 49122049 ~ 49140712 (-)
LOC118965653 NA coding upstream 590546 49396799 ~ 49396853 (-)
LOC110529999 LOC106568697 coding upstream 636455 49442708 ~ 49491248 (-)
LOC110530002 LOC106568700 coding upstream 718485 49524738 ~ 49529686 (-)
LOC118965614 NA coding upstream 770850 49577103 ~ 49578807 (-)
G716484 NA non-coding downstream 18333 48784921 ~ 48785219 (-)
G716483 tnk2 non-coding downstream 18729 48784415 ~ 48784823 (-)
G716470 NA non-coding downstream 32723 48770614 ~ 48770829 (-)
G716466 NA non-coding downstream 39939 48763327 ~ 48763613 (-)
G716409 NA non-coding downstream 126999 48676142 ~ 48676553 (-)
G716509 NA non-coding upstream 21723 48827976 ~ 48828526 (-)
G716512 NA non-coding upstream 26950 48833203 ~ 48833545 (-)
G716513 NA non-coding upstream 27442 48833695 ~ 48833915 (-)
G716529 NA non-coding upstream 50646 48856899 ~ 48857104 (-)
G716543 NA non-coding upstream 58795 48865048 ~ 48865299 (-)
G716488 NA other downstream 14590 48788521 ~ 48788962 (-)
G716480 tnk2 other downstream 21037 48782121 ~ 48782515 (-)
G716463 LOC106591423 other downstream 42389 48759912 ~ 48761163 (-)
G715865 NA other downstream 513971 48288942 ~ 48289581 (-)
G718489 NA other upstream 979421 49785674 ~ 49837696 (-)
LOC110530011 LOC106568709 other upstream 1060377 49866272 ~ 49937001 (-)
G719151 NA other upstream 2130675 50936928 ~ 50939471 (-)
LOC110530043 LOC106568739 other upstream 2446102 51252355 ~ 51259061 (-)
G721275 NA other upstream 3954786 52761039 ~ 52761451 (-)

Expression

G716496 Expression in all Baseline Samples

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G716496 Expression in each Bioproject

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G716496 Expression in each Sample
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Co-expression Network