G716885


Basic Information

Item Value
gene id G716885
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 49368139 ~ 49368339 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU814632
aacgattgacagctgcctctgattgggaaccataccaggccaaacacatagaaatacaacacacagaacaaaacatagaatgaaaaatatagaatgcccaccccatctcacgccctgaccaaaccaaaatagagacataacaaaggaactaaggtcaggacgtgacagccttgatgacagctttgcacactcttggcattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU814632 True 201 lncRNA 0.44 1 49368139 49368339

Neighbor

gene id symbol gene type direction distance location
LOC110530924 LOC106568797 coding upstream 158985 49206999 ~ 49209154 (+)
LOC110529995 LOC106568692 coding upstream 169960 49147967 ~ 49198179 (+)
adipoqb LOC100653481 coding upstream 247830 49117727 ~ 49120309 (+)
LOC110530923 LOC106568690 coding upstream 436461 48902937 ~ 48931678 (+)
tnk2b tnk2 coding upstream 564722 48678813 ~ 48806257 (+)
LOC110529997 LOC106568696 coding downstream 18826 49387165 ~ 49420283 (+)
LOC110530001 LOC106568699 coding downstream 138445 49506784 ~ 49566389 (+)
LOC110530003 LOC106568702 coding downstream 222891 49591230 ~ 49600103 (+)
nyap2b LOC106568706 coding downstream 352323 49720662 ~ 49748389 (+)
LOC110530010 LOC106568707 coding downstream 407176 49775515 ~ 49846428 (+)
G716882 NA non-coding upstream 2637 49365301 ~ 49365502 (+)
G716881 NA non-coding upstream 2873 49365040 ~ 49365266 (+)
G716877 NA non-coding upstream 9579 49358309 ~ 49358560 (+)
G716873 NA non-coding upstream 13952 49353962 ~ 49354187 (+)
G716871 NA non-coding upstream 16544 49351312 ~ 49351595 (+)
G716887 NA non-coding downstream 1410 49369749 ~ 49370066 (+)
G716891 NA non-coding downstream 3976 49372315 ~ 49372517 (+)
gpr158b LOC106568695 non-coding downstream 11470 49278849 ~ 49381386 (+)
G716934 NA non-coding downstream 85677 49454016 ~ 49456841 (+)
G716958 NA non-coding downstream 121949 49490288 ~ 49498508 (+)
G716862 NA other upstream 34367 49332841 ~ 49333772 (+)
G716133 NA other upstream 607399 48760343 ~ 48760740 (+)
G716035 LOC106581475 other upstream 823975 48537743 ~ 48544164 (+)
G713574 NA other upstream 2598893 46715915 ~ 46769246 (+)
G713405 NA other upstream 2901912 46465398 ~ 46466227 (+)
G716993 LOC100136012 other downstream 177873 49546212 ~ 49547085 (+)
LOC118965615 NA other downstream 485048 49853027 ~ 49854435 (+)
LOC110530019 LOC106568718 other downstream 1017207 50384296 ~ 50397007 (+)
LOC110530024 LOC106568723 other downstream 1268357 50607401 ~ 50641183 (+)
G721689 LOC106583873 other downstream 4008893 53377232 ~ 53377705 (+)

Expression


Co-expression Network