G717450


Basic Information

Item Value
gene id G717450
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 49373563 ~ 49374056 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU815223
gAACAAAAAAGACAGAGGGACCCTGCTCACACGTATGTCCTCAGGGTCCAGGCTGTGCTCACTCCAGGCTGAGGTGATGCTGCTGTTGAGGTAGGACCCAGACCGGCCCATGTCCAGCTCCTCCTCATAGGCTTCAGTGGCAATGTCATCCCTTGCCTGAGTCCCTGTGGACAGAAACTAACGAGAGGGGAAAAAACCTACTTAGGGTGACATTATTTAAAATGTTATAGTGCATTTGTTCACGGCGTGCTTGTATTTTCAGGAGGAAAGATTGACATCATCCCACTGTTCCTAATTGTCATCTAATTAAATCTTGAGAAATTAACGGTTTATTCCCCACTCATCGAGTGTTTAAATGTTCTCAAATAAGACTTAAAAATACCCAGATGTGCACTTAAATTACAATACGATAATTATTATTGCAGTAAGAAGCTGTTAAATGTAATGCTCATGTATtcaggggaaagggagaggagagagagcagggttaCCTT

Function

NR:

description
probable G-protein coupled receptor 158

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU815223 True 494 lncRNA 0.43 1 49373563 49374056

Neighbor

gene id symbol gene type direction distance location
LOC110529994 LOC106568693 coding downstream 232851 49122049 ~ 49140712 (-)
dlg1l LOC106568684 coding downstream 756975 48356004 ~ 48616588 (-)
LOC118965521 NA coding downstream 836937 48531522 ~ 48536626 (-)
LOC110529989 LOC106568683 coding downstream 1030553 48329684 ~ 48343010 (-)
LOC110529987 LOC106568679 coding downstream 1479387 47726790 ~ 47894176 (-)
LOC118965653 NA coding upstream 22743 49396799 ~ 49396853 (-)
LOC110529999 LOC106568697 coding upstream 68652 49442708 ~ 49491248 (-)
LOC110530002 LOC106568700 coding upstream 150682 49524738 ~ 49529686 (-)
LOC118965614 NA coding upstream 203047 49577103 ~ 49578807 (-)
LOC110530004 LOC106568703 coding upstream 227483 49601539 ~ 49612229 (-)
G717446 NA non-coding downstream 3631 49369688 ~ 49369932 (-)
G717440 LOC106568695 non-coding downstream 13585 49359616 ~ 49359978 (-)
G717425 NA non-coding downstream 27674 49345547 ~ 49345889 (-)
G717424 LOC106568695 non-coding downstream 28051 49345226 ~ 49345512 (-)
G717418 NA non-coding downstream 43590 49329712 ~ 49329973 (-)
G717452 NA non-coding upstream 2454 49376510 ~ 49376712 (-)
G717527 NA non-coding upstream 139019 49513075 ~ 49514522 (-)
G717528 NA non-coding upstream 142644 49516700 ~ 49516983 (-)
G717531 NA non-coding upstream 146098 49520154 ~ 49520498 (-)
G716488 NA other downstream 584601 48788521 ~ 48788962 (-)
G716480 tnk2 other downstream 591048 48782121 ~ 48782515 (-)
G716463 LOC106591423 other downstream 612400 48759912 ~ 48761163 (-)
G715865 NA other downstream 1083982 48288942 ~ 48289581 (-)
G718489 NA other upstream 411618 49785674 ~ 49837696 (-)
LOC110530011 LOC106568709 other upstream 492574 49866272 ~ 49937001 (-)
G719151 NA other upstream 1562872 50936928 ~ 50939471 (-)
LOC110530043 LOC106568739 other upstream 1878299 51252355 ~ 51259061 (-)
G721275 NA other upstream 3386983 52761039 ~ 52761451 (-)

Expression


Co-expression Network