Gene
RNA
| Item | Value |
|---|---|
| gene id | G716958 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 49490288 ~ 49498508 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| acyl-CoA-binding domain-containing protein 5A-like isoform X1 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU814713 | True | 247 | lncRNA | 0.43 | 2 | 49490288 | 49498508 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529997 | LOC106568696 | coding | upstream | 70005 | 49387165 ~ 49420283 (+) |
| gpr158b | LOC106568695 | coding | upstream | 108902 | 49278849 ~ 49381386 (+) |
| LOC110530924 | LOC106568797 | coding | upstream | 281134 | 49206999 ~ 49209154 (+) |
| LOC110529995 | LOC106568692 | coding | upstream | 292109 | 49147967 ~ 49198179 (+) |
| adipoqb | LOC100653481 | coding | upstream | 369979 | 49117727 ~ 49120309 (+) |
| LOC110530001 | LOC106568699 | coding | downstream | 8276 | 49506784 ~ 49566389 (+) |
| LOC110530003 | LOC106568702 | coding | downstream | 92722 | 49591230 ~ 49600103 (+) |
| nyap2b | LOC106568706 | coding | downstream | 222154 | 49720662 ~ 49748389 (+) |
| LOC110530010 | LOC106568707 | coding | downstream | 277007 | 49775515 ~ 49846428 (+) |
| LOC118965615 | NA | coding | downstream | 354519 | 49853027 ~ 49854435 (+) |
| G716934 | NA | non-coding | upstream | 33447 | 49454016 ~ 49456841 (+) |
| G716891 | NA | non-coding | upstream | 117771 | 49372315 ~ 49372517 (+) |
| G716887 | NA | non-coding | upstream | 120222 | 49369749 ~ 49370066 (+) |
| G716885 | NA | non-coding | upstream | 121949 | 49368139 ~ 49368339 (+) |
| G716970 | NA | non-coding | downstream | 15013 | 49513521 ~ 49514520 (+) |
| G716981 | NA | non-coding | downstream | 21030 | 49519538 ~ 49519990 (+) |
| G716982 | NA | non-coding | downstream | 22057 | 49520565 ~ 49520918 (+) |
| G716984 | NA | non-coding | downstream | 23808 | 49522316 ~ 49522525 (+) |
| G716862 | NA | other | upstream | 156516 | 49332841 ~ 49333772 (+) |
| G716133 | NA | other | upstream | 729548 | 48760343 ~ 48760740 (+) |
| G716035 | LOC106581475 | other | upstream | 946124 | 48537743 ~ 48544164 (+) |
| G713574 | NA | other | upstream | 2721042 | 46715915 ~ 46769246 (+) |
| G713405 | NA | other | upstream | 3024061 | 46465398 ~ 46466227 (+) |
| G716993 | LOC100136012 | other | downstream | 47704 | 49546212 ~ 49547085 (+) |
| LOC110530019 | LOC106568718 | other | downstream | 887038 | 50384296 ~ 50397007 (+) |
| LOC110530024 | LOC106568723 | other | downstream | 1138188 | 50607401 ~ 50641183 (+) |
| G721689 | LOC106583873 | other | downstream | 3878724 | 53377232 ~ 53377705 (+) |
