Gene
RNA
| Item | Value |
|---|---|
| gene id | G717527 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 49513075 ~ 49514522 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU815307 | True | 1448 | lncRNA | 0.48 | 1 | 49513075 | 49514522 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529999 | LOC106568697 | coding | downstream | 21827 | 49442708 ~ 49491248 (-) |
| LOC118965653 | NA | coding | downstream | 116222 | 49396799 ~ 49396853 (-) |
| LOC110529994 | LOC106568693 | coding | downstream | 372363 | 49122049 ~ 49140712 (-) |
| dlg1l | LOC106568684 | coding | downstream | 896487 | 48356004 ~ 48616588 (-) |
| LOC118965521 | NA | coding | downstream | 976449 | 48531522 ~ 48536626 (-) |
| LOC110530002 | LOC106568700 | coding | upstream | 10216 | 49524738 ~ 49529686 (-) |
| LOC118965614 | NA | coding | upstream | 62581 | 49577103 ~ 49578807 (-) |
| LOC110530004 | LOC106568703 | coding | upstream | 87017 | 49601539 ~ 49612229 (-) |
| LOC110530005 | NA | coding | upstream | 115055 | 49629577 ~ 49630769 (-) |
| LOC110530006 | LOC106568704 | coding | upstream | 120953 | 49635475 ~ 49647848 (-) |
| G717452 | NA | non-coding | downstream | 136363 | 49376510 ~ 49376712 (-) |
| G717450 | NA | non-coding | downstream | 139019 | 49373563 ~ 49374056 (-) |
| G717446 | NA | non-coding | downstream | 143143 | 49369688 ~ 49369932 (-) |
| G717440 | LOC106568695 | non-coding | downstream | 153097 | 49359616 ~ 49359978 (-) |
| G717528 | NA | non-coding | upstream | 2178 | 49516700 ~ 49516983 (-) |
| G717531 | NA | non-coding | upstream | 5632 | 49520154 ~ 49520498 (-) |
| G717532 | NA | non-coding | upstream | 7084 | 49521606 ~ 49521933 (-) |
| G717534 | NA | non-coding | upstream | 17465 | 49531987 ~ 49532535 (-) |
| G717539 | NA | non-coding | upstream | 28689 | 49543211 ~ 49544233 (-) |
| G716488 | NA | other | downstream | 724113 | 48788521 ~ 48788962 (-) |
| G716480 | tnk2 | other | downstream | 730560 | 48782121 ~ 48782515 (-) |
| G716463 | LOC106591423 | other | downstream | 751912 | 48759912 ~ 48761163 (-) |
| G715865 | NA | other | downstream | 1223494 | 48288942 ~ 48289581 (-) |
| G718489 | NA | other | upstream | 271152 | 49785674 ~ 49837696 (-) |
| LOC110530011 | LOC106568709 | other | upstream | 352108 | 49866272 ~ 49937001 (-) |
| G719151 | NA | other | upstream | 1422406 | 50936928 ~ 50939471 (-) |
| LOC110530043 | LOC106568739 | other | upstream | 1737833 | 51252355 ~ 51259061 (-) |
| G721275 | NA | other | upstream | 3246517 | 52761039 ~ 52761451 (-) |
