Gene
RNA
| Item | Value |
|---|---|
| gene id | G717534 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 49531987 ~ 49532535 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ATP-dependent zinc metalloprotease YME1L1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU815314 | True | 549 | lncRNA | 0.44 | 1 | 49531987 | 49532535 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530002 | LOC106568700 | coding | downstream | 2301 | 49524738 ~ 49529686 (-) |
| LOC110529999 | LOC106568697 | coding | downstream | 40739 | 49442708 ~ 49491248 (-) |
| LOC118965653 | NA | coding | downstream | 135134 | 49396799 ~ 49396853 (-) |
| LOC110529994 | LOC106568693 | coding | downstream | 391275 | 49122049 ~ 49140712 (-) |
| dlg1l | LOC106568684 | coding | downstream | 915399 | 48356004 ~ 48616588 (-) |
| LOC118965614 | NA | coding | upstream | 44568 | 49577103 ~ 49578807 (-) |
| LOC110530004 | LOC106568703 | coding | upstream | 69004 | 49601539 ~ 49612229 (-) |
| LOC110530005 | NA | coding | upstream | 97042 | 49629577 ~ 49630769 (-) |
| LOC110530006 | LOC106568704 | coding | upstream | 102940 | 49635475 ~ 49647848 (-) |
| zgc:110269 | LOC106568705 | coding | upstream | 115398 | 49647933 ~ 49655158 (-) |
| G717532 | NA | non-coding | downstream | 10054 | 49521606 ~ 49521933 (-) |
| G717531 | NA | non-coding | downstream | 11489 | 49520154 ~ 49520498 (-) |
| G717528 | NA | non-coding | downstream | 15004 | 49516700 ~ 49516983 (-) |
| G717527 | NA | non-coding | downstream | 17465 | 49513075 ~ 49514522 (-) |
| G717539 | NA | non-coding | upstream | 10676 | 49543211 ~ 49544233 (-) |
| G717540 | NA | non-coding | upstream | 12263 | 49544798 ~ 49545015 (-) |
| G717542 | NA | non-coding | upstream | 14097 | 49546632 ~ 49546884 (-) |
| G717543 | NA | non-coding | upstream | 15138 | 49547673 ~ 49547973 (-) |
| G717544 | NA | non-coding | upstream | 15681 | 49548216 ~ 49549071 (-) |
| G716488 | NA | other | downstream | 743025 | 48788521 ~ 48788962 (-) |
| G716480 | tnk2 | other | downstream | 749472 | 48782121 ~ 48782515 (-) |
| G716463 | LOC106591423 | other | downstream | 770824 | 48759912 ~ 48761163 (-) |
| G715865 | NA | other | downstream | 1242406 | 48288942 ~ 48289581 (-) |
| G718489 | NA | other | upstream | 253139 | 49785674 ~ 49837696 (-) |
| LOC110530011 | LOC106568709 | other | upstream | 334095 | 49866272 ~ 49937001 (-) |
| G719151 | NA | other | upstream | 1404393 | 50936928 ~ 50939471 (-) |
| LOC110530043 | LOC106568739 | other | upstream | 1719820 | 51252355 ~ 51259061 (-) |
| G721275 | NA | other | upstream | 3228504 | 52761039 ~ 52761451 (-) |
