Gene
RNA
| Item | Value |
|---|---|
| gene id | G717549 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 49552985 ~ 49553329 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ATP-dependent zinc metalloprotease YME1L1-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU815329 | True | 345 | lncRNA | 0.50 | 1 | 49552985 | 49553329 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530002 | LOC106568700 | coding | downstream | 23299 | 49524738 ~ 49529686 (-) |
| LOC110529999 | LOC106568697 | coding | downstream | 61737 | 49442708 ~ 49491248 (-) |
| LOC118965653 | NA | coding | downstream | 156132 | 49396799 ~ 49396853 (-) |
| LOC110529994 | LOC106568693 | coding | downstream | 412273 | 49122049 ~ 49140712 (-) |
| LOC118965521 | NA | coding | downstream | 1016359 | 48531522 ~ 48536626 (-) |
| LOC118965614 | NA | coding | upstream | 23774 | 49577103 ~ 49578807 (-) |
| LOC110530004 | LOC106568703 | coding | upstream | 48210 | 49601539 ~ 49612229 (-) |
| LOC110530005 | NA | coding | upstream | 76248 | 49629577 ~ 49630769 (-) |
| LOC110530006 | LOC106568704 | coding | upstream | 82146 | 49635475 ~ 49647848 (-) |
| zgc:110269 | LOC106568705 | coding | upstream | 94604 | 49647933 ~ 49655158 (-) |
| G717547 | NA | non-coding | downstream | 899 | 49551887 ~ 49552086 (-) |
| G717546 | NA | non-coding | downstream | 1939 | 49550822 ~ 49551046 (-) |
| G717544 | NA | non-coding | downstream | 3914 | 49548216 ~ 49549071 (-) |
| G717543 | NA | non-coding | downstream | 5012 | 49547673 ~ 49547973 (-) |
| G717542 | NA | non-coding | downstream | 6101 | 49546632 ~ 49546884 (-) |
| G717551 | NA | non-coding | upstream | 824 | 49554153 ~ 49554369 (-) |
| G717553 | NA | non-coding | upstream | 2945 | 49556274 ~ 49556634 (-) |
| G717554 | NA | non-coding | upstream | 3432 | 49556761 ~ 49556979 (-) |
| G717556 | NA | non-coding | upstream | 5536 | 49558865 ~ 49559082 (-) |
| G717560 | NA | non-coding | upstream | 14040 | 49567369 ~ 49567576 (-) |
| G716488 | NA | other | downstream | 764023 | 48788521 ~ 48788962 (-) |
| G716480 | tnk2 | other | downstream | 770470 | 48782121 ~ 48782515 (-) |
| G716463 | LOC106591423 | other | downstream | 791822 | 48759912 ~ 48761163 (-) |
| dlg1l | LOC106568684 | other | downstream | 936462 | 48356004 ~ 48616588 (-) |
| G715865 | NA | other | downstream | 1263404 | 48288942 ~ 48289581 (-) |
| G718489 | NA | other | upstream | 232345 | 49785674 ~ 49837696 (-) |
| LOC110530011 | LOC106568709 | other | upstream | 313301 | 49866272 ~ 49937001 (-) |
| G719151 | NA | other | upstream | 1383599 | 50936928 ~ 50939471 (-) |
| LOC110530043 | LOC106568739 | other | upstream | 1699026 | 51252355 ~ 51259061 (-) |
| G721275 | NA | other | upstream | 3207710 | 52761039 ~ 52761451 (-) |
