XLOC_026271 (CU571315.3)


Basic Information

Item Value
gene id XLOC_026271
gene name CU571315.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 19487707 ~ 19495814 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051234
agtcagtcagtcaggacACACCAGAACTGaagaatgatgtttaacacagttTTCTGTGTGGCTGGAGCTGTACTTCTCAACATTGCAGGCTGTCTGGGTCAGTCAGATGTCTGTGGTCGAGCGCCTCTCAACACCAAGATTGTTGGTGGACTGAATGCAACAGAAGGGTCTTGGCCCTGGCAGGCCAGCATTAACTTCAAGTCAACAGGACAATTTTTCTGCAGCGGGTCACTAATCAGTGAAAGATGGGTTTTGACAGCTGCTAGCTGCTTTCAGAGAATTAATGTGTCTGACGTTGTGATCTACTTGGGACGTCTGACCACAAATGGCTCAAACCCATATGAGATACCCAGGACAGTGATTCAAGTCAGTGTCACCGAAGATATAGCACTTGTCCAGCTCTCTTCCTCCGTGACTTTCACTGATTACATTAGGCCAGTGTGTCTGGCTGCTGCTGGTAGTGTGTTTGTTGACGGGACAGAGAGTTGGGTCACAGGATGGGGCTCGACTAGTTCGACAAATGTAATCCTTTCTGATATGCTGAAGGAGGTGGAGGCCCCTATTGTGAACAACATTGAATGCAGTAATATCAATGGAATCACAAATTTAGACAACGTAATATGTGCTGGATTTGTAAATGAGACAGGAAAAGCCCCATGTTGGGAAGATTTTGGAAGCCCACTGGTGACTAGACAGGGCTCCCAGTGGATTCAGTCTGGAGTTGTAGTCTTTACGTTTTGTGGTCAAAATGGCTTTCCTACTCTATATGCCAGAGTGTCTGAATATGAGGAGTGGATCCGCAACTACACCAGCAGCAGTCTGCCTGGATTTCTCTCATATCCCGTCATTTACACTTTCATGAATGAAGGATCAGTCAACGTCCCCTCATTTCTTGTTCTCACATTCTCCATCATCACTCTCTTCATCTCACGCTTCTTTTGAAGACTGAGTTATGATGATTTCTGGGATGTGGTACTATAATTATTACAATACttcttataattataatatatacttcTAGAGCAATTCCTGTTTTTACTTAAGATTAATTATTAGGGAGAGATTTTGTTggtgtttaatgttttattttgagattTCTATATCTTTAAAGTTTctacacatttttgttttatttgttttatttttccttcaTTCTCTGCGTTTGACAGTTCATTACAAAAGCATATGTTTGCCCTCTTTCTTTTTAGTATAGGTCACAATTCACTGCATTAACAAACCATCAACTAACACCACTATCCTAATAAACCACAAATTAGCTGATTATTAATAGTTACGGTTGAAGTTGGCATGACAATAAGATTATCAGTTATAAATACTAattaacagttaatatcttaataataaacaggtaataagccagtagtcaGCATGAATTGTGATCTAAACTAAAGAGTTACCCTAAAATCACGTTTTACCAGTGGATAATATCAAATGCTAGATTTAAAAACATCAATAGCTCACAAATAATTACCTCCATCATAAGCATCTTTATCCATGCTGTGACCACATATAATCAAATAAGTGTATCAGCAGATGGCGCCATAAatcaaatatatcaaaatatattttacctTTAACTGGCGAGGATCACTCAGTCTTTTTTTGTGTGAGTTTAAAGATTTTtaagaaatgtattttcttttttctttgcttgAGCTCTTTTGCTTGAGCTTTCTTAGATTTTATTGATGTGGGCTGACCCAAGACAGTAAAGTGCTTTATTAAACTTctacctaacacacacacacacacacacacacacacacacacacacaaacacacacacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatatatatatatatatatatatatatatatatttt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101990

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051234 True 1910 mRNA 0.38 6 19487707 19495814

Neighbor

gene id symbol gene type direction distance location
XLOC_026270 s1pr5a coding downstream 119272 19364948 ~ 19368435 (-)
XLOC_026269 BX322663.2 coding downstream 154076 19333504 ~ 19333631 (-)
XLOC_026268 BX546473.1 coding downstream 270984 19207234 ~ 19216723 (-)
XLOC_026267 rfx1a coding downstream 287056 19152222 ~ 19200651 (-)
XLOC_026266 grin2ca coding downstream 354704 19005187 ~ 19133003 (-)
XLOC_026272 CU571315.2 coding upstream 11601 19507415 ~ 19517462 (-)
XLOC_026273 zgc:163079 coding upstream 61790 19557604 ~ 19561058 (-)
XLOC_026274 BX572620.1 coding upstream 317434 19813248 ~ 19820807 (-)
XLOC_026275 rnd2 coding upstream 355123 19850937 ~ 19899914 (-)
XLOC_026276 NA coding upstream 475867 19971681 ~ 19973620 (-)
XLOC_026265 CU151886.3 non-coding downstream 513067 18972408 ~ 18974640 (-)
XLOC_026257 NA non-coding downstream 1022714 18461357 ~ 18464993 (-)
XLOC_026252 NA non-coding downstream 1195490 18109375 ~ 18292217 (-)
XLOC_026277 CR855865.1 non-coding upstream 490527 19986341 ~ 19992463 (-)
XLOC_026283 NA non-coding upstream 634460 20130274 ~ 20401724 (-)
XLOC_026285 NA non-coding upstream 1405252 20901066 ~ 20915710 (-)

Expression


Co-expression Network