G717006


Basic Information

Item Value
gene id G717006
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 49575963 ~ 49576240 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU814761
agtgtgttggcagcagccactcaatgttagtggtggctgtttaacagtctgatggccttgagatagaagctgtttttcagtctctcggtccctgctttgatgcacctgtacggacctcgccttctggatgatagcggggtcaacaggcagtggctcgggtggttcttgtccttgatgatctttatggccttcctgtgacatcgggtggtgcaggtgtcctggagggcaggtagtttgcccccggtgatgcgttgtgcagacctcactaccctctggag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU814761 True 278 lncRNA 0.55 1 49575963 49576240

Neighbor

gene id symbol gene type direction distance location
LOC110530001 LOC106568699 coding upstream 11179 49506784 ~ 49566389 (+)
LOC110529997 LOC106568696 coding upstream 155680 49387165 ~ 49420283 (+)
gpr158b LOC106568695 coding upstream 194577 49278849 ~ 49381386 (+)
LOC110530924 LOC106568797 coding upstream 366809 49206999 ~ 49209154 (+)
LOC110529995 LOC106568692 coding upstream 377784 49147967 ~ 49198179 (+)
LOC110530003 LOC106568702 coding downstream 14990 49591230 ~ 49600103 (+)
nyap2b LOC106568706 coding downstream 144422 49720662 ~ 49748389 (+)
LOC110530010 LOC106568707 coding downstream 199275 49775515 ~ 49846428 (+)
LOC118965615 NA coding downstream 276787 49853027 ~ 49854435 (+)
LOC110529118 LOC106598598 coding downstream 428741 50004981 ~ 50007814 (+)
G716968 NA non-coding upstream 9175 49566554 ~ 49566788 (+)
G716994 NA non-coding upstream 28519 49547201 ~ 49547444 (+)
G716986 NA non-coding upstream 42999 49532692 ~ 49532964 (+)
G716984 NA non-coding upstream 53438 49522316 ~ 49522525 (+)
G717078 NA non-coding downstream 125448 49701688 ~ 49707303 (+)
G717719 NA non-coding downstream 273399 49849639 ~ 49849938 (+)
G717721 NA non-coding downstream 274566 49850806 ~ 49851036 (+)
G717724 NA non-coding downstream 279137 49855377 ~ 49855628 (+)
G717726 NA non-coding downstream 280046 49856286 ~ 49856491 (+)
G716993 LOC100136012 other upstream 28878 49546212 ~ 49547085 (+)
G716862 NA other upstream 242191 49332841 ~ 49333772 (+)
G716133 NA other upstream 815223 48760343 ~ 48760740 (+)
G716035 LOC106581475 other upstream 1031799 48537743 ~ 48544164 (+)
G713574 NA other upstream 2806717 46715915 ~ 46769246 (+)
LOC110530019 LOC106568718 other downstream 809306 50384296 ~ 50397007 (+)
LOC110530024 LOC106568723 other downstream 1060456 50607401 ~ 50641183 (+)
G721689 LOC106583873 other downstream 3800992 53377232 ~ 53377705 (+)
mrpl34 mrpl34 other downstream 4094156 53670348 ~ 53674103 (+)

Expression


Co-expression Network