Gene
RNA
| Item | Value |
|---|---|
| gene id | G718580 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 49924061 ~ 49924328 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU816461 | True | 268 | lncRNA | 0.47 | 1 | 49924061 | 49924328 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965522 | NA | coding | downstream | 37835 | 49881643 ~ 49886226 (-) |
| zgc:110269 | LOC106568705 | coding | downstream | 268903 | 49647933 ~ 49655158 (-) |
| LOC110530006 | LOC106568704 | coding | downstream | 276213 | 49635475 ~ 49647848 (-) |
| LOC110530005 | NA | coding | downstream | 293292 | 49629577 ~ 49630769 (-) |
| LOC110530004 | LOC106568703 | coding | downstream | 311832 | 49601539 ~ 49612229 (-) |
| LOC110530012 | LOC106568711 | coding | upstream | 40586 | 49964914 ~ 49970082 (-) |
| LOC118965625 | NA | coding | upstream | 59061 | 49983389 ~ 49986205 (-) |
| LOC110530015 | LOC106568800 | coding | upstream | 169169 | 50093497 ~ 50095929 (-) |
| LOC110530016 | LOC106568717 | coding | upstream | 413403 | 50337731 ~ 50366270 (-) |
| LOC110530021 | LOC106568720 | coding | upstream | 488652 | 50412980 ~ 50434788 (-) |
| LOC110530011 | LOC106568709 | non-coding | downstream | 2920 | 49866272 ~ 49937001 (-) |
| G718546 | NA | non-coding | downstream | 59328 | 49864505 ~ 49864733 (-) |
| G718544 | NA | non-coding | downstream | 63278 | 49859964 ~ 49860783 (-) |
| G718541 | NA | non-coding | downstream | 68662 | 49855104 ~ 49855399 (-) |
| G718537 | NA | non-coding | downstream | 73533 | 49850241 ~ 49850528 (-) |
| G718581 | NA | non-coding | upstream | 314 | 49924642 ~ 49924880 (-) |
| G718590 | NA | non-coding | upstream | 10505 | 49934833 ~ 49935036 (-) |
| G718594 | NA | non-coding | upstream | 19388 | 49943716 ~ 49944228 (-) |
| G718598 | NA | non-coding | upstream | 23440 | 49947768 ~ 49948123 (-) |
| G718625 | NA | non-coding | upstream | 70598 | 49994926 ~ 50001193 (-) |
| G718489 | NA | other | downstream | 86365 | 49785674 ~ 49837696 (-) |
| G716488 | NA | other | downstream | 1135099 | 48788521 ~ 48788962 (-) |
| G716480 | tnk2 | other | downstream | 1141546 | 48782121 ~ 48782515 (-) |
| G716463 | LOC106591423 | other | downstream | 1162898 | 48759912 ~ 48761163 (-) |
| G719151 | NA | other | upstream | 1012600 | 50936928 ~ 50939471 (-) |
| LOC110530043 | LOC106568739 | other | upstream | 1328027 | 51252355 ~ 51259061 (-) |
| G721275 | NA | other | upstream | 2836711 | 52761039 ~ 52761451 (-) |
| LOC110529122 | LOC106568971 | other | upstream | 3538854 | 53462034 ~ 53478913 (-) |
| G722459 | NA | other | upstream | 3573820 | 53495804 ~ 53499730 (-) |
