G717954


Basic Information

Item Value
gene id G717954
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 50241653 ~ 50242025 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU815792
ggagagggacagaagctatactgttacactggcaatactaaagtgcctataagaacatccaataatcaaaggttaatgaaatacaaatggtatagagggaaatagtcctataataactacaacctaaaacttcttacctgggaatattgaagactcatgttaaaaggaaccaccagctttcatatgttctcatgttctgagcaaggaactgaaacgttagctttcttacatagcacatattgcacttttacgttcttctccaacactttgtttttgcattatttaaaccaaattgagcatgtttcattatctacttgaggctaaattgattttatttatgtattatattaagttaaaataagtgttaattcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU815792 True 373 lncRNA 0.32 1 50241653 50242025

Neighbor

gene id symbol gene type direction distance location
LOC110530014 LOC107558802 coding upstream 169662 50043342 ~ 50071991 (+)
LOC110530925 LOC106568799 coding upstream 203169 50015178 ~ 50038484 (+)
LOC110529118 LOC106598598 coding upstream 233839 50004981 ~ 50007814 (+)
LOC118965615 NA coding upstream 387218 49853027 ~ 49854435 (+)
LOC110530010 LOC106568707 coding upstream 395225 49775515 ~ 49846428 (+)
LOC110530020 LOC106568719 coding downstream 137746 50379771 ~ 50383088 (+)
LOC110530019 LOC106568718 coding downstream 142271 50384296 ~ 50397007 (+)
LOC110530022 LOC106568721 coding downstream 192910 50434935 ~ 50441957 (+)
LOC110530023 LOC106568722 coding downstream 201679 50443704 ~ 50578861 (+)
LOC110530024 LOC106568723 coding downstream 365376 50607401 ~ 50641183 (+)
G717953 LOC100136012 non-coding upstream 3172 50238255 ~ 50238481 (+)
G717952 NA non-coding upstream 3444 50237956 ~ 50238209 (+)
G717779 NA non-coding upstream 306247 49935196 ~ 49935406 (+)
G717768 NA non-coding upstream 320556 49920708 ~ 49921097 (+)
G717767 NA non-coding upstream 321204 49920234 ~ 49920449 (+)
G717955 NA non-coding downstream 794 50242819 ~ 50243034 (+)
G717970 NA non-coding downstream 36684 50278709 ~ 50278971 (+)
G718044 NA non-coding downstream 172675 50414700 ~ 50416134 (+)
G718053 LOC106568720 non-coding downstream 188897 50430922 ~ 50434684 (+)
G718060 LOC106568726 non-coding downstream 431838 50673863 ~ 50685225 (+)
G716993 LOC100136012 other upstream 694568 49546212 ~ 49547085 (+)
G716862 NA other upstream 907881 49332841 ~ 49333772 (+)
G716133 NA other upstream 1480913 48760343 ~ 48760740 (+)
G716035 LOC106581475 other upstream 1697489 48537743 ~ 48544164 (+)
G721689 LOC106583873 other downstream 3135207 53377232 ~ 53377705 (+)
mrpl34 mrpl34 other downstream 3428371 53670348 ~ 53674103 (+)
rps28 NA other downstream 3684192 53926018 ~ 53927959 (+)

Expression


Co-expression Network