G717955


Basic Information

Item Value
gene id G717955
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 50242819 ~ 50243034 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU815793
ataaaagtctccaacttcagcgatttttgcaattcgttccagtcacaggcagcagagaactggaaggaaaagccggccaaatgaggtgttggctttagggatgatctgtgagatacacctgctggagcgcgtgctacgggtgggtgttgcgatcgtgaccagtgaactgagataaggcggagctttacctagcatggacttgtagatgacctggag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU815793 True 216 lncRNA 0.50 1 50242819 50243034

Neighbor

gene id symbol gene type direction distance location
LOC110530014 LOC107558802 coding upstream 170828 50043342 ~ 50071991 (+)
LOC110530925 LOC106568799 coding upstream 204335 50015178 ~ 50038484 (+)
LOC110529118 LOC106598598 coding upstream 235005 50004981 ~ 50007814 (+)
LOC118965615 NA coding upstream 388384 49853027 ~ 49854435 (+)
LOC110530010 LOC106568707 coding upstream 396391 49775515 ~ 49846428 (+)
LOC110530020 LOC106568719 coding downstream 136737 50379771 ~ 50383088 (+)
LOC110530019 LOC106568718 coding downstream 141262 50384296 ~ 50397007 (+)
LOC110530022 LOC106568721 coding downstream 191901 50434935 ~ 50441957 (+)
LOC110530023 LOC106568722 coding downstream 200670 50443704 ~ 50578861 (+)
LOC110530024 LOC106568723 coding downstream 364367 50607401 ~ 50641183 (+)
G717954 NA non-coding upstream 794 50241653 ~ 50242025 (+)
G717953 LOC100136012 non-coding upstream 4338 50238255 ~ 50238481 (+)
G717952 NA non-coding upstream 4610 50237956 ~ 50238209 (+)
G717779 NA non-coding upstream 307413 49935196 ~ 49935406 (+)
G717768 NA non-coding upstream 321722 49920708 ~ 49921097 (+)
G717970 NA non-coding downstream 35675 50278709 ~ 50278971 (+)
G718044 NA non-coding downstream 171666 50414700 ~ 50416134 (+)
G718053 LOC106568720 non-coding downstream 187888 50430922 ~ 50434684 (+)
G718060 LOC106568726 non-coding downstream 430829 50673863 ~ 50685225 (+)
G718164 LOC106568727 non-coding downstream 448127 50691161 ~ 50692973 (+)
G716993 LOC100136012 other upstream 695734 49546212 ~ 49547085 (+)
G716862 NA other upstream 909047 49332841 ~ 49333772 (+)
G716133 NA other upstream 1482079 48760343 ~ 48760740 (+)
G716035 LOC106581475 other upstream 1698655 48537743 ~ 48544164 (+)
G721689 LOC106583873 other downstream 3134198 53377232 ~ 53377705 (+)
mrpl34 mrpl34 other downstream 3427362 53670348 ~ 53674103 (+)
rps28 NA other downstream 3683183 53926018 ~ 53927959 (+)

Expression


Co-expression Network