G718053 (LOC106568720)


Basic Information

Item Value
gene id G718053
gene name LOC106568720
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 50430922 ~ 50434684 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU815899
CTCACAGCCGAACCCACAGGTCAAAGTCTCCAGCGTAGCCAAGTATTTGACCTTGATGTCATGGATGTTGACTTTGTTGCTCTTCACTGTCTTGTTGTTGAACTCGTTAAGGAAGTGCTGAAACACCCGGGAGATGCGGAGTCGTGTCAGGAAGTTCCGCTGCTTGATGATTTGGTTCATGCTCTCTGGGATGTATTTCTTATAGCTGATCTGTCCTGCTAAATATGGGTTGACAATGTTCTTCTCCAAGGCATTGTGTGTGATAGACAACACTGCCACCCCCAGGCACTCATTCTCAATACAGTGGGCCTCCTCTTCATTCTGAGGGTTACGCACTGCGGCCCGCCCCTTCAGGAAGTCATGCTGACCCTGGGCAAACAGATACTTCAGTGAGGCAGCCTCAAGGAGTGCCGTACCCCCTGATTCGGTCTTCGGCCCATTGCCGTTCTTTCTCTTGAGGGCATGTCTGCAAACACGTGGCACATTGTCATTCGCACCATGCCAGTTGGTGAAGTAGAACCTGGATAAAGAGACAGTGACCAGTGACAATAACCTATGAAACGCCCCATAATGAAACTCACCTATGTCTATTACTTTATTACCGTCCACGAATGTCTGAAAAAAATGACTTTCTCTTCCAGAACGGCCCAATATCAGTGTAGGCTACTTATATTATCCTATTATGATGATGTTTTTGAGCATGTATCATCGATAAGGGTTTTAAATCCTGTGCAATGAAGTTGCTAAGTCTCGACGGTGAGTCTTCCAAGCAAGCGTCTTGTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU815899 True 783 lncRNA 0.47 4 50430922 50434684

Neighbor

gene id symbol gene type direction distance location
LOC110530019 LOC106568718 coding upstream 33915 50384296 ~ 50397007 (+)
LOC110530020 LOC106568719 coding upstream 47834 50379771 ~ 50383088 (+)
LOC110530017 LOC106568715 coding upstream 94597 50146364 ~ 50336325 (+)
LOC110530014 LOC107558802 coding upstream 358931 50043342 ~ 50071991 (+)
LOC110530925 LOC106568799 coding upstream 392438 50015178 ~ 50038484 (+)
LOC110530022 LOC106568721 coding downstream 251 50434935 ~ 50441957 (+)
LOC110530023 LOC106568722 coding downstream 9020 50443704 ~ 50578861 (+)
LOC110530024 LOC106568723 coding downstream 172717 50607401 ~ 50641183 (+)
mier1b LOC100380719 coding downstream 214034 50648718 ~ 50665624 (+)
LOC110530037 LOC106568733 coding downstream 498848 50933532 ~ 50939589 (+)
G718044 NA non-coding upstream 14788 50414700 ~ 50416134 (+)
G717970 NA non-coding upstream 151951 50278709 ~ 50278971 (+)
G717955 NA non-coding upstream 187888 50242819 ~ 50243034 (+)
G717954 NA non-coding upstream 188897 50241653 ~ 50242025 (+)
G717953 LOC100136012 non-coding upstream 192441 50238255 ~ 50238481 (+)
G718060 LOC106568726 non-coding downstream 239179 50673863 ~ 50685225 (+)
G718164 LOC106568727 non-coding downstream 256477 50691161 ~ 50692973 (+)
G718200 NA non-coding downstream 300698 50735382 ~ 50735600 (+)
G718231 NA non-coding downstream 346635 50781319 ~ 50781583 (+)
G718218 NA non-coding downstream 366112 50800796 ~ 50801006 (+)
LOC118965615 NA other upstream 576730 49853027 ~ 49854435 (+)
G716993 LOC100136012 other upstream 883837 49546212 ~ 49547085 (+)
G716862 NA other upstream 1097150 49332841 ~ 49333772 (+)
G716133 NA other upstream 1670182 48760343 ~ 48760740 (+)
G721689 LOC106583873 other downstream 2942548 53377232 ~ 53377705 (+)
mrpl34 mrpl34 other downstream 3235712 53670348 ~ 53674103 (+)
rps28 NA other downstream 3491533 53926018 ~ 53927959 (+)
LOC118965528 LOC106568937 other downstream 4189490 54557953 ~ 54670115 (+)

Expression


Co-expression Network