G718060 (LOC106568726)


Basic Information

Item Value
gene id G718060
gene name LOC106568726
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 50673863 ~ 50685225 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU815917
atgtagaaaataaaaaaaaaataaaaaaaaaaagggcTTTACTTCAGAGTTCTGGTGCTGATAGGAACCAAGTGCTTTGCAAACTCTAAAAGATTAGACTACAAATACTACATTTATCAAAGACTCTAATTGCAAGATATGTCCACAATCTTACCTAGATAGTCATTTCTATGTTCTCAGAAATAAAAACTACTTCAGGCCAAACCGAGCTGCTTTTGAACTTGCGGTCAAGTTCCTGGAGAATGTCAAGTCCGTGGCAGGGGAGTACTTCAAGTGTTTAAGTAATTATTGTTCACAGTCaacccaatcacacacacacacacacacacaccaaaatacAATATATTCGCATAGTGGTCTTAAGGTTACTAATAGTATAGCCTGTACAACCTACAAGGACCAGCCTAGATACACATTTGGGCCATGGCTGCCCTAAAGACACAGGTAGTAACATCTGGACCAGGGATAAAACACACCAACCACTGGTCCACCAGAAAAATAAGAGCCAAGCTATCAATAGGAAAATAAAAGGAAACCAGAGGCATCAACTTTCACTGCATAACAAGCAGAAACATTACACTTATAAGGAGTCACTACTTTTAAAAACACAGTTCATAGATTTAGTACAAAGGTACTAAAACATATTTTAAAGTTTAACATCTGAGTAATGCATGACTTAAAAGTCAccccttcaaaataaaagcttgtCTAAGATGACCACAAAATATTCAGGTAAAGTCATGAGGAAAGCCAGCCAAAGCCTaaggaggaacacacacacttcaacctCAATCTTGGAAATGCATATATTCAAGCAGCAATACAAAAAAATATCCATGAAGTATATACGCATAATCTCtgaaaaaaacaaataatatatGAAAACATCCCTGCTATCTTGTCTCTAAATACAAAACTTCTACCAATAACTTGCTTCAGTGTAACAAGAGAAGTAATTTTTcctcttttttttgtctttttatcAGTCCTTTCAAAACAGGTTAAAATGTCAGTCCTCAGCTGTGAATGGTATGGATGACTGTCTTCTTTTCGTCGTTAAAATCATTTCCtttttttctcctcttctctcatatACTTGAAGTTGTAAGCATGCAAGCCTCATAGGAGGGGGGGCGGAGGCGCTGACGGAGCGGGCTGGTGGCGATGCTGAAGTCTTAGGCCAGGGCTGGGAAGGCCTCTGGGTCGTCAACATT
>TU815915
ttgcaatttcacagtattattccaacctcagtgtagaaatatagaaaaacactttttttttaagagtgtTCTTTTTAAAAGTCACAGTAATGATCTCACACAACTCACTGCCAGGGGCAGAATACATTTAACACCTCTAAGCAATTTATTAGAACAGGGATGTTTGCAGAAAAGTCTACCGTCAAATGGCTCAAACAGTCCTACAAAAGGTTTGCTCCAGTCACCTGTGTCCCTGTATTACCAGCAAGTCTTTCCAGAGCATTGGAATATAAAGCTTTCAGTCACTTAAAATAGTAAAATGTACCCCTTCCCCAAACCCAATGTGTGAAGTATACCTACTTCGGTACAATAAAACCTAGCCTGGAAATGCAAGACACAGATGACTACAAGCACGATTAGCAGTCATACATTCTGTAGCACTCGATTGCTCCACATTGAACGGCACATTTCTTTCAGACAAATTATGCTGTAGTGCTGCTGTAGTAATTATAACAAAATGCAAAAATAACAGCAAAGATGATCACAAgagggaaaataaaataaaaaaaaatttaaaaaaaagggcTTTACTTCAGAGTTCTGGTGCTGATAGGAACCAAGTGCTTTGCAAACTCTAAAAGATTAGACTACAAATACTACATTTATCAAAGACTCTAATTGCAAGATATGTCCACAATCTTACCTAGATAGTCATTTCTATGTTCTCAGAAATAAAAACTACTTCAGGCCAAACCGAGCTGCTTTTGAACTTGCGGTCAAGTTCCTGGAGAATGTCAAGTCCGTGGCAGGGGAGTACTTCAAGTGTTTAAGTAATTATTGTTCACAGTCaacccaatcacacacacacacacacacacaccaaaatacAATATATTCGCATAGTGGTCTTAAGGTTACTAATAGTATAGCCTGTACAACCTACAAGGACCAGCCTAGATACACATTTGGGCCATGGCTGCCCTAAAGACACAGGTAGTAACATCTGGACCAGGGATAAAACACACCAACCACTGGTCCACCAGAAAAATAAGAGCCAAGCTATCAATAGGAAAATAAAAGGAAACCAGAGGCATCAACTTTCACTGCATAACAAGCAGAAACATTACACTTATAAGGAGTCACTACTTTTAAAAACACAGTTCATAGATTTAGTACAAAGGTACTAAAACATATTTTAAAGTTTAACATCTGAGTAATGCATGACTTAAAAGTCAccccttcaaaataaaagcttgtCTAAGATGACCACAAAATATTCAGGTAAAGTCATGAGGAAAGCCAGCCAAAGCCTaaggaggaacacacacacttcaacctCAATCTTGGAAATGCATATATTCAAGCAGCAATACAAAAAAATATCCATGAAGTATATACGCATAATCTCtgaaaaaaacaaataatatatGAAAACATCCCTGCTATCTTGTCTCTAAATACAAAACTTCTACCAATAACTTGCTTCAGTGTAACAAGAGAAGTAATTTTTcctcttttttttgtctttttatcAGTCCTTTCAAAACAGGTTAAAATGTCAGTCCTCAGCTGTGAATGGTATGGATGACTGTCTTCTTTTCGTCGTTAAAATCATTTCCtttttttctcctcttctctcatatACTTGAAGTTGTAAGCATGCAAGCCTCATAGGAGGGGGGGCGGAGGCGCTGACGGAGCGGGCTGGTGGCGATGCTGAAGTCTTAGGCCAGGGCTGGGAAGGCCTCTGGGTCGTCAACATT
>TU815914
TCTTTTTAAAAGTCACAGTAATGATCTCACACAACTCACTGCCAGGGGCAGAATACATTTAACACCTCTAAGCAATTTATTAGAACAGGGATGTTTGCAGAAAAGTCTACCGTCAAATGGCTCAAACAGTCCTACAAAAGGTTTGCTCCAGTCACCTGTGTCCCTGTATTACCAGCAAGTCTTTCCAGAGCATTGGAATATAAAGCTTTCAGTCACTTAAAATAGTAAAATGTACCCCTTCCCCAAACCCAATGTGTGAAGTATACCTACTTCGGTACAATAAAACCTAGCCTGGAAATGCAAGACACAGATGACTACAAGCACGATTAGCAGTCATACATTCTGTAGCACTCGATTGCTCCACATTGAACGGCACATTTCTTTCAGACAAATTATGCTGTAGTGCTGCTGTAGTAATTATAACAAAATGCAAAAATAACAGCAAAGATGATCACAAgagggaaaataaaataaaaaaaaatttaaaaaaaagggcTTTACTTCAGAGTTCTGGTGCTGATAGGAACCAAGTGCTTTGCAAACTCTAAAAGATTAGACTACAAATACTACATTTATCAAAGACTCTAATTGCAAGATATGTCCACAATCTTACCTAGATAGTCATTTCTATGTTCTCAGAAATAAAAACTACTTCAGGCCAAACCGAGCTGCTTTTGAACTTGCGGTCAAGTTCCTGGAGAATGTCAAGTCCGTGGCAGGGGAGTACTTCAAGTGTTTAAGTAATTATTGTTCACAGTCaacccaatcacacacacacacacacacacaccaaaatacAATATATTCGCATAGTGGTCTTAAGGTTACTAATAGTATAGCCTGTACAACCTACAAGGACCAGCCTAGATACACATTTGGGCCATGGCTGCCCTAAAGACACAGGTAGTAACATCTGGACCAGGGATAAAACACACCAACCACTGGTCCACCAGAAAAATAAGAGCCAAGCTATCAATAGGAAAATAAAAGGAAACCAGAGGCATCAACTTTCACTGCATAACAAGCAGAAACATTACACTTATAAGGAGTCACTACTTTTAAAAACACAGTTCATAGATTTAGTACAAAGGTACTAAAACATATTTTAAAGTTTAACATCTGAGTAATGCATGACTTAAAAGTCAccccttcaaaataaaagcttgtCTAAGATGACCACAAAATATTCAGGTAAAGTCATGAGGAAAGCCAGCCAAAGCCTaaggaggaacacacacacttcaacctCAATCTTGGAAATGCATATATTCAAGCAGCAATACAAAAAAATATCCATGAAGTATATACGCATAATCTCtgaaaaaaacaaataatatatGAAAACATCCCTGCTATCTTGTCTCTAAATACAAAACTTCTACCAATAACTTGCTTCAGTGTAACAAGAGAAGTAATTTTTcctcttttttttgtctttttatcAGTCCTTTCAAAACAGGTTAAAATGTCAGTCCTCAGCTGTGAATGGTATGGATGACTGTCTTCTTTTCGTCGTTAAAATCATTTCCtttttttctcctcttctctcatatACTTGAAGTTGTAAGCATGCAAGCCTCATAGGAGGGGGGGCGGAGGCGCTGACGGAGCGGGCTGGTGGCGATGCTGAAGTCTTAGGCCAGGGCTGGGAAGGCCTCTGGGTCGTCAACATTGGGAACAGACACTCCACCTGGCTTTTCGGGTCGAACTCCCCCTGCGCGAACCGGACGGTCGGATCGGCCGCCTCCTCCACCGCGGCCTCCCCTTCCTCCACGGGCTCCCCCGCGCCCGCGCCCAGGGCGGCCCAGGTCTCCAAAGTTGATCTCCAGCTGGGCTGTGATGTCGTTGGCGGGCTTGCGGAAGTGGTGGTCCGGGCCGATTTCATCAGGGTTGCCCTTGAACAAGGGGGTCAACTCTTCAATCTCCGGAGTATCAATCACAGCTGGTCTATCTTTAGGCTTTTCGTCGCTGACATCTTCGCTCTTGGACTTGTGCAGCATGTAGCCCTTGTTCCACTTGCTGTCGGCTCCCTCGTTGGGCTTGCGGATGTTAAACTCCACCTTGGCACGCTCCTTATCCTGCATGGCCTTCCATTCGTCCAGGGTCATCTCCTTGGGGCCCTCCTCCTTAGGTTCCTCTACTTCGTTCTCCTTATTCTCAGAGTCAGCAGGGGTGTGTTCCACTCCCTCAGGGGTTTCCTCAGGGGCAGTAGTCTGTTCGGCATCAACACTCGTTTCGTCCTTGGGGTTTCCCCGGTTGTGAACACCACTCCCGCCACGCTTCTCCTCGGATTTCTGAGGTTTGTCGCCACCACTGTGTCTGTCGAAGTCCCGTTTGCCGCGGGAGTCGAAGCTGTCGCCCCGGCCCATGCCCCGTCCCCGTCCACCACGCCCAGCACGGCTGCCACCGCGCCCTCTGGGGGGCCGGTCTCCTAGAGGCTTGTCTACAGAGAACTCTCCTCTTTCTCCACCGTCGGGCTTGTCCTCAAGGGGTTTGTCGAAGCGGCGCTCGCGTGGGGGTCTCCTGTTGTCCGGCCTCCTGTCGCCGGTGGGCCGCCCCTCCCCCTGCCCGCCCTGGGTGCCAGGCTGGCCCTGCTGGTCCGGCCTTCGGCCCACCCGCCTGATAACTGCTTCTTTCTTCGGAGGTACTGGAGCCTGAGTTTCATCTTTTTTGTCAAGGAGCGGATTCTTCCTGTCCTTCTGTGACTCTTTCTTGGGCTGCTTGGCAGCTTGGGCTGCAGACTTGGTGATACTAGCTGCGGCCGCCTCTTTCTTCTTGTTCTCCGCCGCCTTTAACACCTCGAACGGATCTGATTCATCGTCCAATAGCTGGTCAAACCGATTCGTTACGACGCAGCCGAAGCCTTCTTGCAGTTGTCCGGGCATGATGGCGCCCCTTCGGCGGGATTTACCTCCGATTCTACGAGGCTGGCTGCGAACAATTCGCTAGATACTGCCACAAGATGGCTGGGAAATGTACC
>TU815918
TCTTTTTAAAAGTCACAGTAATGATCTCACACAACTCACTGCCAGGGGCAGAATACATTTAACACCTCTAAGCAATTTATTAGAACAGGGATGTTTGCAGAAAAGTCTACCGTCAAATGGCTCAAACAGTCCTACAAAAGGTTTGCTCCAGTCACCTGTGTCCCTGTATTACCAGCAAGTCTTTCCAGAGCATTGGAATATAAAGCTTTCAGTCACTTAAAATAGTAAAATGTACCCCTTCCCCAAACCCAATGTGTGAAGTATACCTACTTCGGTACAATAAAACCTAGCCTGGAAATGCAAGACACAGATGACTACAAGCACGATTAGCAGTCATACATTCTGTAGCACTCGATTGCTCCACATTGAACGGCACATTTCTTTCAGACAAATTATGCTGTAGTGCTGCTGTAGTAATTATAACAAAATGCAAAAATAACAGCAAAGATGATCACAAgagggaaaataaaataaaaaaaaatttaaaaaaaagggcTTTACTTCAGAGTTCTGGTGCTGATAGGAACCAAGTGCTTTGCAAACTCTAAAAGATTAGACTACAAATACTACATTTATCAAAGACTCTAATTGCAAGATATGTCCACAATCTTACCTAGATAGTCATTTCTATGTTCTCAGAAATAAAAACTACTTCAGGCCAAACCGAGCTGCTTTTGAACTTGCGGTCAAGTTCCTGGAGAATGTCAAGTCCGTGGCAGGGGAGTACTTCAAGTGTTTAAGTAATTATTGTTCACAGTCaacccaatcacacacacacacacacacacaccaaaatacAATATATTCGCATAGTGGTCTTAAGGTTACTAATAGTATAGCCTGTACAACCTACAAGGACCAGCCTAGATACACATTTGGGCCATGGCTGCCCTAAAGACACAGGTAGTAACATCTGGACCAGGGATAAAACACACCAACCACTGGTCCACCAGAAAAATAAGAGCCAAGCTATCAATAGGAAAATAAAAGGAAACCAGAGGCATCAACTTTCACTGCATAACAAGCAGAAACATTACACTTATAAGGAGTCACTACTTTTAAAAACACAGTTCATAGATTTAGTACAAAGGTACTAAAACATATTTTAAAGTTTAACATCTGAGTAATGCATGACTTAAAAGTCAccccttcaaaataaaagcttgtCTAAGATGACCACAAAATATTCAGGTAAAGTCATGAGGAAAGCCAGCCAAAGCCTaaggaggaacacacacacttcaacctCAATCTTGGAAATGCATATATTCAAGCAGCAATACAAAAAAATATCCATGAAGTATATACGCATAATCTCtgaaaaaaacaaataatatatGAAAACATCCCTGCTATCTTGTCTCTAAATACAAAACTTCTACCAATAACTTGCTTCAGTGTAACAAGAGAAGTAATTTTTcctcttttttttgtctttttatcAGTCCTTTCAAAACAGGTTAAAATGTCAGTCCTCAGCTGTGAATGGTATGGATGACTGTCTTCTTTTCGTCGTTAAAATCATTTCCtttttttctcctcttctctcatatACTTGAAGTTGTAAGCATGCAAGCCTCATAGGAGGGGGGGCGGAGGCGCTGACGGAGCGGGCTGGTGGCGATGCTGAAGTCTTAGGCCAGGGCTGGGAAGGCCTCTGGGTCGTCAACATTGGGAACAGACACTCCACCTGGCTTTTCGGGTCGAACTCCCCCTGCGCGAACCGGACGGTCGGATCGGCCGCCTCCTCCACCGCGGCCTCCCCTTCCTCCACGGGCTCCCCCGCGCCCGCGCCCAGGGCGGCCCAGGTCTCCAAAGTTGATCTCCAGCTGGGCTGTGATGTCGTTGGCGGGCTTGCGGAAGTGGTGGTCCGGGCCGATTTCATCAGGGTTGCCCTTGAACAAGGGGGTCAACTCTTCAATCTCCGGAGTATCAATCACAGCTGGTCTATCTTTAGGCTTTTCGTCGCTGACATCTTCGCTCTTGGACTTGTGCAGCATGTAGCCCTTGTTCCACTTGCTGTCGGCTCCCTCGTTGGGCTTGCGGATGTTAAACTCCACCTTGGCACGCTCCTTATCCTGCATGGCCTTCCATTCGTCCAGGGTCATCTCCTTGGGGCCCTCCTCCTTAGGTTCCTCTACTTCGTTCTCCTTATTCTCAGAGTCAGCAGGGGTGTGTTCCACTCCCTCAGGGGTTTCCTCAGGGGCAGTAGTCTGTTCGGCATCAACACTCGTTTCGTCCTTGGGGTTTCCCCGGTTGTGAACACCACTCCCGCCACGCTTCTCCTCGGATTTCTGAGGTTTGTCGCCACCACTGTGTCTGTCGAAGTCCCGTTTGCCGCGGGAGTCGAAGCTGTCGCCCCGGCCCATGCCCCGTCCCCGTCCACCACGCCCAGCACGGCTGCCACCGCGCCCTCTGGGGGGCCGGTCTCCTAGAGGCTTGTCTACAGAGAACTCTCCTCTTTCTCCACCGTCGGGCTTGTCCTCAAGGGGTTTGTCGAAGCGGCGCTCGCGTGGGGGTCTCCTGTTGTCCGGCCTCCTGTCGCCGGTGGGCCGCCCCTCCCCCTGCCCGCCCTGGGTGCCAGGCTGGCCCTGCTGGTCCGGCCTTCGGCCCACCCGCCTGATAACTTCTTTCTTCGGAGGTACTGGAGCCTGAGTTTCATCTTTTTTGTCAAGGAGCGGATTCTTCCTGTCCTTCTGTGACTCTTTCTTGGGCTGCTTGGCAGCTTGGGCTGCAGACTTGGTGATACTAGCTGCGGCCGCCTCTTTCTTCTTGTTCTCCGCCGCCTTTAACACCTCGAACGGATCTGATTCATCGTCCAATAGCTGGTCAAACCGATTCGTTACGACGCAGCCGAAGCCTTCTTGCAGTTGTCCGGGCATGATGGCGCCCCTTCGGCGGGATTTACCTCCGATTCTACGAGGCTGGCTGCGAACAATTCGCTAGATACTGCCACAAGATGGCTGGGAAATGTACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU815917 False 1214 lncRNA 0.38 2 50673863 50679877
TU815915 False 1742 lncRNA 0.38 2 50677953 50679877
TU815914 False 2980 lncRNA 0.48 9 50678205 50685225
TU815918 True 2977 lncRNA 0.48 9 50678205 50685225

Neighbor

gene id symbol gene type direction distance location
mier1b LOC100380719 coding upstream 8239 50648718 ~ 50665624 (+)
LOC110530024 LOC106568723 coding upstream 32680 50607401 ~ 50641183 (+)
LOC110530023 LOC106568722 coding upstream 95002 50443704 ~ 50578861 (+)
LOC110530022 LOC106568721 coding upstream 231906 50434935 ~ 50441957 (+)
LOC110530019 LOC106568718 coding upstream 276856 50384296 ~ 50397007 (+)
LOC110530037 LOC106568733 coding downstream 248307 50933532 ~ 50939589 (+)
LOC110530926 LOC106568801 coding downstream 257900 50943125 ~ 50944659 (+)
LOC110530038 LOC106568734 coding downstream 270183 50955408 ~ 50957451 (+)
LOC110530039 NA coding downstream 304823 50990048 ~ 50995826 (+)
LOC110530041 cdc73 coding downstream 316742 51001967 ~ 51066824 (+)
G718053 LOC106568720 non-coding upstream 239179 50430922 ~ 50434684 (+)
G718044 NA non-coding upstream 257729 50414700 ~ 50416134 (+)
G717970 NA non-coding upstream 394892 50278709 ~ 50278971 (+)
G717955 NA non-coding upstream 430829 50242819 ~ 50243034 (+)
G717954 NA non-coding upstream 431838 50241653 ~ 50242025 (+)
G718164 LOC106568727 non-coding downstream 5936 50691161 ~ 50692973 (+)
G718200 NA non-coding downstream 50157 50735382 ~ 50735600 (+)
G718231 NA non-coding downstream 96094 50781319 ~ 50781583 (+)
G718218 NA non-coding downstream 115571 50800796 ~ 50801006 (+)
G718255 NA non-coding downstream 133282 50818507 ~ 50818848 (+)
LOC118965615 NA other upstream 819671 49853027 ~ 49854435 (+)
G716993 LOC100136012 other upstream 1126778 49546212 ~ 49547085 (+)
G716862 NA other upstream 1340091 49332841 ~ 49333772 (+)
G721689 LOC106583873 other downstream 2692007 53377232 ~ 53377705 (+)
mrpl34 mrpl34 other downstream 2985171 53670348 ~ 53674103 (+)
rps28 NA other downstream 3240992 53926018 ~ 53927959 (+)
LOC118965528 LOC106568937 other downstream 3938949 54557953 ~ 54670115 (+)
LOC110530153 LOC106568927 other downstream 4448805 55120291 ~ 55136638 (+)

Expression


Co-expression Network