G719069


Basic Information

Item Value
gene id G719069
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 50736259 ~ 50738316 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU816994
tttgaaatctttcaaatatttTAAGCATCCGCTTTAAGATGGGCACTTTTGGGACTGTTCTATTACATCCATTGCAaaaggcaagctcaatcaagcacagctgaagtatttgaaattatttcaaatagtatttgaacccatgtctgcTCTTCTCATATTCAGCACCGATTCTCCTCTGGATACGACTTTCCGTTCTCCAACTAACATTGACCTTTTCAACTATCTGTCTCTGTGGGTATTTATAGCTATTTTCTGTCTGTGGACTGTGTTGAGATCATTTTTAAAGGTGCCGGCCTAACTGGGAGAGTGAGAAGACAACAGCGCTGGTCTTCGGATTGGGTCAGTACCCTTGGGAGCATTCGTTAAGCTCAACGTGACAAGACTACTGACACCTCCCTGTTGCCTAACTTTGGGTAGCTAATGAGGTCGAACACATAAATGTTGGACATGCTACAAAACATTTGATGTTTATGGAATCGAGTGTTTTGACTCATCAGAGTTCTGAAGGTGTGTgcccctgtctgatggttgactTCATGACTATATAGCTGATATGACGGTCATTTCTAAATCAGTATTTTCAGTGCTTCAGCTTAAAGTGCAG
>TU816988
aatcacacagaattacacatacacataattaaatcgtAACTCGATttcaaattacgtcataaaggaaaaagtccctagcgggcggaacagatatgacagctggttacacaaaagaaaaaggctgggtttgagtgaaagagcgggaagactgaggaacaaagggcgaagctgtgctatcgtaaatacagaatcttatgcattctaaattaccgcccatttggaaaaggaaaatgcaataaatatttactctgagctgcgcttcggtaggttggtggtagatggaaggccgtgttgcccaactgagtcctttgtcctttgaagaatgtctctgctggtaaattggatacgttgtagtaatgtcgttatgtggtagacgggatactctgtctgttccttcctaacctgcattTGCaactgctgttgctaactcaacggctaggaggtatcacttctgtagtgaataagagttcaaagtacataccattcgcaaccaaagctcacgctgatgttggcttcgttctgtagttatctgaaccattctgacatcggaccgtcgtcctcacatcctcggaacaggaggttacattgtcgtcaaggctttatataggaagggagaggagggcgtgtttgaaaagttttatagcccatgtcccttcacaggggcgggccactgattgagcatagCCCTAACcgtatgaaaacccaaatctcacattttagaagctaaaatcacatttcatcccatcacgaataatttaatattcaaacatttaaattgaacaacaattccatgtgaatctgataactctgatgtgtagactttccactgtagagtttgtcatcttatcattgtctcagatgacaaccgaactgacatcatattcattaagtaccaccgcatatgttcaattggttggaataccagaatatagttcatttcccaccaccttctgatgttcccagaatctctatgttaaccaaggtgtttgcaaatgtaacatcagtagggtagagagaggaaaaagggggggaagaggtatttatgactgtcataaacctacccccaggccaacttCATGACACTCTCAATGGTTTATTTTCAGGGTCATGTCTTTTCTGATATGAAAGTGTACAAAAAGTGGAAAGGGAAGATACAtccagttggacaactgactaagTGCATTCAGTTAGGTGTGATGTCACTAATGCTCTCCTCACTGAATTAAACA
>TU816985
cgggatactctgtctgttccttcctaacctgcattTGCaactgctgttgctaactcaacggctaggaggtatcacttctgtagtgaataagagttcaaagtacataccattcgcaaccaaagctcacgctgatgttggcttcgttctgtagttatctgaaccattctgacatcggaccgtcgtcctcacatcctcggaacaggaggttacattgtcgtcaaggctttatataggaagggagaggagggcgtgtttgaaaagttttatagcccatgtcccttcacaggggcgggccactgattgagcatagCCCTAACcgtatgaaaacccaaatctcacattttagaagctaaaatcacatttcatcccatcacgaataatttaatattcaaacatttaaattgaacaacaattccatgtgaatctgataactctgatgtgtagactttccactgtagagtttgtcatcttatcattgtctcagatgacaaccgaactgacatcatattcattaagtaccaccgcatatgttcaattggttggaataccagaatatagttcatttcccacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU816994 False 604 lncRNA 0.41 1 50736259 50736862
TU816988 False 1229 lncRNA 0.41 1 50737088 50738316
TU816985 True 571 lncRNA 0.42 1 50737372 50737942
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110530033 LOC106568728 coding downstream 6325 50716128 ~ 50729934 (-)
hsd17b7 LOC106568727 coding downstream 25838 50690347 ~ 50710421 (-)
LOC110530028 LOC106568726 coding downstream 51001 50678172 ~ 50685258 (-)
LOC110530027 LOC106568725 coding downstream 61942 50665631 ~ 50674317 (-)
LOC110530021 LOC106568720 coding downstream 301471 50412980 ~ 50434788 (-)
LOC110530034 LOC106568730 coding upstream 2660 50740976 ~ 50767911 (-)
LOC110530035 LOC106568731 coding upstream 52904 50791220 ~ 50793594 (-)
LOC110530036 LOC106568732 coding upstream 96224 50834540 ~ 50848805 (-)
LOC110530040 LOC106568735 coding upstream 294249 51032565 ~ 51067801 (-)
LOC110530042 kcnt2 coding upstream 389298 51127614 ~ 51189612 (-)
G719068 NA non-coding downstream 1726 50734077 ~ 50734533 (-)
G719056 NA non-coding downstream 21325 50714582 ~ 50714934 (-)
G718931 NA non-coding downstream 22252 50688240 ~ 50714007 (-)
G718986 NA non-coding downstream 164519 50571308 ~ 50571740 (-)
G719114 NA non-coding upstream 80466 50818782 ~ 50818987 (-)
G719202 NA non-coding upstream 217153 50955469 ~ 50957241 (-)
G719208 NA non-coding upstream 261078 50999394 ~ 51075009 (-)
G719250 NA non-coding upstream 343417 51081733 ~ 51082025 (-)
LOC110530011 LOC106568709 other downstream 847007 49866272 ~ 49937001 (-)
G718489 NA other downstream 898563 49785674 ~ 49837696 (-)
G716488 NA other downstream 1947297 48788521 ~ 48788962 (-)
G716480 tnk2 other downstream 1953744 48782121 ~ 48782515 (-)
G716463 LOC106591423 other downstream 1975096 48759912 ~ 48761163 (-)
G719151 NA other upstream 198612 50936928 ~ 50939471 (-)
LOC110530043 LOC106568739 other upstream 514039 51252355 ~ 51259061 (-)
G721275 NA other upstream 2022723 52761039 ~ 52761451 (-)
LOC110529122 LOC106568971 other upstream 2724866 53462034 ~ 53478913 (-)
G722459 NA other upstream 2759832 53495804 ~ 53499730 (-)

Expression

G719069 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 6.
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G719069 Expression in each Bioproject

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G719069 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network