G718231


Basic Information

Item Value
gene id G718231
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 50781319 ~ 50781583 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU816100
catgatacttttaatagaacacagaaaaatacaaaatgacaacgtgaaataacaaaaaccgaaacagttccatgtggaacacacagacacagaaaataatcacccaccactcaaaagtgaaaccaggctacctaagtatggttctcaatcagggacaacgattaacagctgcctctgattgagaaccataccaggccaaacacagaaatcccaaatgaaagaaaaaggaacatagactgcccaccccaactcacgccctgaccat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU816100 True 265 lncRNA 0.41 1 50781319 50781583

Neighbor

gene id symbol gene type direction distance location
mier1b LOC100380719 coding upstream 115695 50648718 ~ 50665624 (+)
LOC110530024 LOC106568723 coding upstream 140136 50607401 ~ 50641183 (+)
LOC110530023 LOC106568722 coding upstream 202458 50443704 ~ 50578861 (+)
LOC110530022 LOC106568721 coding upstream 339362 50434935 ~ 50441957 (+)
LOC110530019 LOC106568718 coding upstream 384312 50384296 ~ 50397007 (+)
LOC110530037 LOC106568733 coding downstream 151949 50933532 ~ 50939589 (+)
LOC110530926 LOC106568801 coding downstream 161542 50943125 ~ 50944659 (+)
LOC110530038 LOC106568734 coding downstream 173825 50955408 ~ 50957451 (+)
LOC110530039 NA coding downstream 208465 50990048 ~ 50995826 (+)
LOC110530041 cdc73 coding downstream 220384 51001967 ~ 51066824 (+)
G718200 NA non-coding upstream 45719 50735382 ~ 50735600 (+)
G718164 LOC106568727 non-coding upstream 88346 50691161 ~ 50692973 (+)
G718060 LOC106568726 non-coding upstream 96094 50673863 ~ 50685225 (+)
G718053 LOC106568720 non-coding upstream 346635 50430922 ~ 50434684 (+)
G718044 NA non-coding upstream 365185 50414700 ~ 50416134 (+)
G718218 NA non-coding downstream 19213 50800796 ~ 50801006 (+)
G718255 NA non-coding downstream 36924 50818507 ~ 50818848 (+)
G718279 LOC106568732 non-coding downstream 65945 50847528 ~ 50848799 (+)
G718357 NA non-coding downstream 178610 50960193 ~ 50960416 (+)
G718363 NA non-coding downstream 183865 50965448 ~ 50965647 (+)
LOC118965615 NA other upstream 927127 49853027 ~ 49854435 (+)
G716993 LOC100136012 other upstream 1234234 49546212 ~ 49547085 (+)
G716862 NA other upstream 1447547 49332841 ~ 49333772 (+)
G721689 LOC106583873 other downstream 2595649 53377232 ~ 53377705 (+)
mrpl34 mrpl34 other downstream 2888813 53670348 ~ 53674103 (+)
rps28 NA other downstream 3144634 53926018 ~ 53927959 (+)
LOC118965528 LOC106568937 other downstream 3842591 54557953 ~ 54670115 (+)
LOC110530153 LOC106568927 other downstream 4352447 55120291 ~ 55136638 (+)

Expression


Co-expression Network