G718255


Basic Information

Item Value
gene id G718255
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 50818507 ~ 50818848 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU816128
GATATACCAGCAGATGGCAGCAAAGTCTCACTTTTAAAATAATCAACATCGGTCAGTCCAAGCAGCTTGTTAAAAGCAGTatttattcaatgcatttcttatCTACTGAACCAAGTTACATCAAATTGTATTGATCGCATACACattttttagcagatgttattgcgggtgtagcgaaatgcttgtgttcctagctccaacagtgcagtagtatctaacaattcacaacaatgtacacaactaaaagtaaaagaatggaattaagaaatatataaatattaggacgagcaatgttggagtggcattgattTAAATACCgtagaatacagtatagacatgtga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU816128 True 342 lncRNA 0.35 1 50818507 50818848

Neighbor

gene id symbol gene type direction distance location
mier1b LOC100380719 coding upstream 152883 50648718 ~ 50665624 (+)
LOC110530024 LOC106568723 coding upstream 177324 50607401 ~ 50641183 (+)
LOC110530023 LOC106568722 coding upstream 239646 50443704 ~ 50578861 (+)
LOC110530022 LOC106568721 coding upstream 376550 50434935 ~ 50441957 (+)
LOC110530019 LOC106568718 coding upstream 421500 50384296 ~ 50397007 (+)
LOC110530037 LOC106568733 coding downstream 114684 50933532 ~ 50939589 (+)
LOC110530926 LOC106568801 coding downstream 124277 50943125 ~ 50944659 (+)
LOC110530038 LOC106568734 coding downstream 136560 50955408 ~ 50957451 (+)
LOC110530039 NA coding downstream 171200 50990048 ~ 50995826 (+)
LOC110530041 cdc73 coding downstream 183119 51001967 ~ 51066824 (+)
G718218 NA non-coding upstream 17501 50800796 ~ 50801006 (+)
G718231 NA non-coding upstream 36924 50781319 ~ 50781583 (+)
G718200 NA non-coding upstream 82907 50735382 ~ 50735600 (+)
G718164 LOC106568727 non-coding upstream 125534 50691161 ~ 50692973 (+)
G718060 LOC106568726 non-coding upstream 133282 50673863 ~ 50685225 (+)
G718279 LOC106568732 non-coding downstream 28680 50847528 ~ 50848799 (+)
G718357 NA non-coding downstream 141345 50960193 ~ 50960416 (+)
G718363 NA non-coding downstream 146600 50965448 ~ 50965647 (+)
G718368 NA non-coding downstream 150835 50969683 ~ 50971478 (+)
G718058 NA non-coding downstream 158393 50977241 ~ 51075015 (+)
LOC118965615 NA other upstream 964315 49853027 ~ 49854435 (+)
G716993 LOC100136012 other upstream 1271422 49546212 ~ 49547085 (+)
G716862 NA other upstream 1484735 49332841 ~ 49333772 (+)
G721689 LOC106583873 other downstream 2558384 53377232 ~ 53377705 (+)
mrpl34 mrpl34 other downstream 2851548 53670348 ~ 53674103 (+)
rps28 NA other downstream 3107369 53926018 ~ 53927959 (+)
LOC118965528 LOC106568937 other downstream 3805326 54557953 ~ 54670115 (+)
LOC110530153 LOC106568927 other downstream 4315182 55120291 ~ 55136638 (+)

Expression


Co-expression Network