G718058


Basic Information

Item Value
gene id G718058
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 50977241 ~ 51075015 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU815907
ttcctgtttgCACAATGCCTTAGTCTCAGTATCAGCCAACGGCTGGCTATGTGAAAACAGGAACTACATACATTAAGACACACAAACTCAAGACACACATATGCTGCACAAGATTATAACTTatctaggacacacacacacacacacccaccctggACTCAAGAAGACAACAAGGACATTGAGCAACGGCTGAAGCGATGGACTGCAGGAGCCAATCATCGGAGACTACGCCTGGACCTGAACCAACCATAGAACCAGAACTTCAAGACTCAACCTACTTTCTGTGCTGTATAAAATATGTAAACAAACTGTATTAGGGGCTCTCTCTTTTAGCTCACTCGGAGTTACTTGACAGAGCCCATGCATGCTata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU815907 True 372 lncRNA 0.45 2 50977241 51075015

Neighbor

gene id symbol gene type direction distance location
LOC110530038 LOC106568734 coding upstream 19790 50955408 ~ 50957451 (+)
LOC110530926 LOC106568801 coding upstream 32582 50943125 ~ 50944659 (+)
LOC110530037 LOC106568733 coding upstream 37652 50933532 ~ 50939589 (+)
mier1b LOC100380719 coding upstream 311617 50648718 ~ 50665624 (+)
LOC110530024 LOC106568723 coding upstream 336058 50607401 ~ 50641183 (+)
LOC110530928 LOC106568738 coding downstream 139412 51214427 ~ 51239797 (+)
LOC110530044 LOC106568740 coding downstream 197231 51272246 ~ 51312687 (+)
ephb3a LOC106568743 coding downstream 344717 51419732 ~ 51465235 (+)
LOC110530050 LOC106568745 coding downstream 435111 51510126 ~ 51512502 (+)
LOC110530929 NA coding downstream 474048 51549063 ~ 51560792 (+)
G718368 NA non-coding upstream 5763 50969683 ~ 50971478 (+)
G718363 NA non-coding upstream 11594 50965448 ~ 50965647 (+)
G718357 NA non-coding upstream 16825 50960193 ~ 50960416 (+)
G718279 LOC106568732 non-coding upstream 128442 50847528 ~ 50848799 (+)
G718255 NA non-coding upstream 158393 50818507 ~ 50818848 (+)
G718444 NA non-coding downstream 33565 51108580 ~ 51108793 (+)
G719353 NA non-coding downstream 153849 51228864 ~ 51229113 (+)
G719339 NA non-coding downstream 175847 51250862 ~ 51251868 (+)
G719338 NA non-coding downstream 177344 51252359 ~ 51259022 (+)
G719369 NA non-coding downstream 190317 51265332 ~ 51265569 (+)
LOC110530019 LOC106568718 other upstream 583405 50384296 ~ 50397007 (+)
LOC118965615 NA other upstream 1123049 49853027 ~ 49854435 (+)
G716993 LOC100136012 other upstream 1430156 49546212 ~ 49547085 (+)
G716862 NA other upstream 1643469 49332841 ~ 49333772 (+)
G721689 LOC106583873 other downstream 2302217 53377232 ~ 53377705 (+)
mrpl34 mrpl34 other downstream 2595381 53670348 ~ 53674103 (+)
rps28 NA other downstream 2851202 53926018 ~ 53927959 (+)
LOC118965528 LOC106568937 other downstream 3549159 54557953 ~ 54670115 (+)
LOC110530153 LOC106568927 other downstream 4059015 55120291 ~ 55136638 (+)

Expression


Co-expression Network