G719886 (LOC106568745)


Basic Information

Item Value
gene id G719886
gene name LOC106568745
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 51511287 ~ 51575248 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU817888
attattctacaatgtagaaaatagtaaaaataaagaaacccttgaatgagtaggtgtgtccaaacttttgactggtactgtatatatttcttattattatcattatttattTTCTAGGGGGTGCTTGAGCACCCTCAGGACCACTACTGCCCTCGGCTATGTTTGGCTCTATATACTCTCAGTTTTGGAAATGCTAATtcgcatcaaagtagacatcatgcaagactacaaatccctgccaGCTCCTGCACGTCATATCTAGCTGACACCATTGCTAACAGGTACTGTGtccatttaaaacttgcacaagacagttcacagaattgttcATTTAAAGAATTTttgccaatttattcattactacattcAGCTAACATTCTTCCCATTGCCTCGATTCAGAAGTCTTGTTCAGATCGTCATGGCATTTGCAGTTCTTTATCATAGCCaaattagcagctaattagcatttcattttgtgCGGGTAAATACAGGCGAATATATTGATTAAAGTCatcttgtcctagagagatttacacggttatcaaaacgtcacgccagagTAAGCCTCCATGAAATACAACCCTTATTTTAAGTgcttctaaaatcccctatgggaaaagtGAAtagtggaaaaacgattggaaccatttccctgtttgaccattaggttttatgggtattatgactcatactgtggtactctatgttAATTTGTTTTGTTCAAACAAAGCATTGGCACACACGCAAACTAAAATAACATGATGTGAAAGGAAGAAAGCTTTGGAACATTTAAAAACAGGCTAATGCCACGTTCACATGCTAGTCAAAACTAGGAAACcgatCAGCACGTGAACGCGGCATTTGCAAGATAGATGATTGTCCCACCTACTTCTATAGACAGCCATATATGGATGGTAGCATGTATTCACTAACTAggaaccaaaccaaaccaaacagaAGAAACTGTTGCAAACAAAAGCAGACGGAACAAAACGGAGGGACATACCTGAATGTAATGGAAACTCGAATGCAACTAAAAAATACACTCTTGGTTatcagtctgtttgtgccatcatgccagTCCTTGCCGCTCCTTGTCATGCCGACAATGACAATTAATTGACAagacaaacagatctgagaccaggctatcaATGGATCTCTTATGTTAAGCAGACATTTACATTCAAATGGCCGTATGCTTGTTTATGTTTAAGAAACTACGTAGCCAAAGCACAGATGCACTCCTTTGTATAGGCTACATAACACAATGTTACTACATGTATGTTTTCTATTGTTGAGTTCCAAACAGCTAAATGATTAGAATTCACGACACAGTATTTGCTCATGAAAATTTTAAAAACAGCGGTCAATATaatttgttttaatttttttgcAGACTTTGGAGAGAATTCATTTTCCCAGTTTAAGAATATACTGTAAAACAGAGTGCATTATTATCATCAAATGTTTGTCCCTTgcactaaaaaaaaaaatcaagtggCCCCTATCCCCATTATTCCCCCTTCAGTTCACTGATTAGGTATGGTTCCTGTTCCATAAGGATATCTAAGAACACATCTTTGCCTTTGGACCCAGATGCTTTCAGAGGGACATCTATGAGCTCCCTCATCCTGTTCTGTTTGGTTTTTTCAGCCCTCACGTCACTGTAGGCATTTGAGGTGATGACTCCCCTCTGCAGGAGCCTATCCAAGATGGGTGCCACCTGGCTCACTCTGTCGATCAGGGCCGTCCGGTGATGATCCACAAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU817888 True 1772 lncRNA 0.39 3 51511287 51575248
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110530046 LOC106568804 coding downstream 130424 51377904 ~ 51380863 (-)
LOC110530045 LOC106568741 coding downstream 187687 51316294 ~ 51323600 (-)
LOC110530043 LOC106568739 coding downstream 252226 51252355 ~ 51259061 (-)
LOC110530042 kcnt2 coding downstream 321675 51127614 ~ 51189612 (-)
LOC110530040 LOC106568735 coding downstream 443486 51032565 ~ 51067801 (-)
LOC110530053 LOC106568748 coding upstream 8277 51583525 ~ 51591883 (-)
si:dkey-18p12.4 LOC106568750 coding upstream 73290 51648538 ~ 51689345 (-)
eif4a2 LOC106568752 coding upstream 166966 51742214 ~ 51751447 (-)
LOC118965688 NA coding upstream 168629 51743877 ~ 51744055 (-)
LOC118965689 NA coding upstream 173976 51749224 ~ 51749294 (-)
G719854 NA non-coding downstream 45059 51465976 ~ 51466228 (-)
G719842 NA non-coding downstream 64303 51446739 ~ 51446984 (-)
G719841 LOC106568743 non-coding downstream 65767 51445220 ~ 51445520 (-)
G719835 LOC106568743 non-coding downstream 71892 51438954 ~ 51439395 (-)
G719930 NA non-coding upstream 12704 51587952 ~ 51588192 (-)
G719970 NA non-coding upstream 65121 51640369 ~ 51640659 (-)
G719981 NA non-coding upstream 106883 51682131 ~ 51686715 (-)
G719992 NA non-coding upstream 131209 51706457 ~ 51706712 (-)
G719151 NA other downstream 571816 50936928 ~ 50939471 (-)
LOC110530011 LOC106568709 other downstream 1622035 49866272 ~ 49937001 (-)
G718489 NA other downstream 1673591 49785674 ~ 49837696 (-)
G716488 NA other downstream 2722325 48788521 ~ 48788962 (-)
G721275 NA other upstream 1185791 52761039 ~ 52761451 (-)
LOC110529122 LOC106568971 other upstream 1887934 53462034 ~ 53478913 (-)
G722459 NA other upstream 1922900 53495804 ~ 53499730 (-)
G722602 NA other upstream 2228195 53803443 ~ 53856065 (-)
G722670 NA other upstream 2350980 53926228 ~ 53927959 (-)

Expression

G719886(LOC106568745) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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G719886(LOC106568745) Expression in each Bioproject

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G719886(LOC106568745) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30.
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Co-expression Network