G719993



Basic Information


Item Value
gene id G719993
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 51707790 ~ 51708111 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU818001
ATGTATTACTATGTAGATGTCTATTCAGTGTTCACTATTCAGTGTTCGGGGTTTAATTTATGTTCTGTCCCGTTATAGCTGTCCACCctgtcacggttttctaggtgtgaaggagagtcggaccaaaatgcggcgtgtctattgcaatccatgtttaatgaagaaacacactaaacacaaacactaccaaaacaataaacttaacgaaaaccgaaacagcctatacttgtgtatcctaacacagaacaatgacatcaggacactaaggacaatcacccacgacaaactcaaagaatatggctgcctaaatatggttcccaat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU818001 True 322 lncRNA 0.40 1 51707790 51708111

Neighbor


gene id symbol gene type direction distance location
si:dkey-18p12.4 LOC106568750 coding downstream 18445 51648538 ~ 51689345 (-)
LOC110530053 LOC106568748 coding downstream 115907 51583525 ~ 51591883 (-)
LOC110530052 LOC106568747 coding downstream 125435 51560800 ~ 51582355 (-)
LOC110530051 LOC106568746 coding downstream 160856 51525267 ~ 51546934 (-)
mfsd8l2 LOC106568744 coding downstream 190881 51496080 ~ 51516909 (-)
eif4a2 LOC106568752 coding upstream 34103 51742214 ~ 51751447 (-)
LOC118965688 NA coding upstream 35766 51743877 ~ 51744055 (-)
LOC118965689 NA coding upstream 41113 51749224 ~ 51749294 (-)
LOC118965644 NA coding upstream 41639 51749750 ~ 51749819 (-)
LOC118965691 NA coding upstream 41999 51750110 ~ 51750180 (-)
G719992 NA non-coding downstream 1078 51706457 ~ 51706712 (-)
G719981 NA non-coding downstream 21075 51682131 ~ 51686715 (-)
G719970 NA non-coding downstream 67131 51640369 ~ 51640659 (-)
G719930 NA non-coding downstream 119598 51587952 ~ 51588192 (-)
G719994 NA non-coding upstream 194 51708305 ~ 51708550 (-)
G720003 NA non-coding upstream 8356 51716467 ~ 51716743 (-)
G720009 NA non-coding upstream 13562 51721673 ~ 51721970 (-)
G720112 NA non-coding upstream 51172 51759283 ~ 51763591 (-)
G720399 LOC106568761 non-coding upstream 347119 52055230 ~ 52059713 (-)
LOC110530043 LOC106568739 other downstream 448771 51252355 ~ 51259061 (-)
G719151 NA other downstream 768319 50936928 ~ 50939471 (-)
LOC110530011 LOC106568709 other downstream 1818538 49866272 ~ 49937001 (-)
G718489 NA other downstream 1870094 49785674 ~ 49837696 (-)
G716488 NA other downstream 2918828 48788521 ~ 48788962 (-)
G721275 NA other upstream 1052928 52761039 ~ 52761451 (-)
LOC110529122 LOC106568971 other upstream 1755071 53462034 ~ 53478913 (-)
G722459 NA other upstream 1790037 53495804 ~ 53499730 (-)
G722602 NA other upstream 2095332 53803443 ~ 53856065 (-)
G722670 NA other upstream 2218117 53926228 ~ 53927959 (-)

Expression


G719993 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
End of interactive chart.

G719993 Expression in each Bioproject

Bar chart with 18 bars.
G719993 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
End of interactive chart.

Co-expression Network