Gene
RNA
| Item | Value |
|---|---|
| gene id | G720449 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 52110669 ~ 52110983 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109108415 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU818499 | True | 315 | lncRNA | 0.56 | 1 | 52110669 | 52110983 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cmpk | LOC106568761 | coding | upstream | 50946 | 52053382 ~ 52059723 (+) |
| LOC110530067 | LOC106568759 | coding | upstream | 61899 | 52030973 ~ 52048770 (+) |
| LOC110530065 | s22bb | coding | upstream | 86709 | 52019740 ~ 52023960 (+) |
| zgc:153115 | LOC106568757 | coding | upstream | 122342 | 51982632 ~ 51988327 (+) |
| LOC110530063 | LOC106568806 | coding | upstream | 198376 | 51902098 ~ 51912293 (+) |
| dis3l2 | dis3l2 | coding | downstream | 119695 | 52230678 ~ 52248262 (+) |
| LOC110530076 | LOC106568765 | coding | downstream | 144151 | 52255134 ~ 52282393 (+) |
| agxtb | agxt | coding | downstream | 337288 | 52448271 ~ 52459617 (+) |
| trnap-ugg-10 | NA | coding | downstream | 654518 | 52765413 ~ 52765655 (+) |
| LOC110530086 | LOC106568992 | coding | downstream | 660952 | 52771935 ~ 52775359 (+) |
| G720448 | NA | non-coding | upstream | 874 | 52109575 ~ 52109795 (+) |
| G720443 | NA | non-coding | upstream | 3964 | 52106502 ~ 52106705 (+) |
| G720301 | NA | non-coding | upstream | 41018 | 52069100 ~ 52069651 (+) |
| G720207 | NA | non-coding | upstream | 192443 | 51916895 ~ 51918226 (+) |
| G720021 | LOC106568752 | non-coding | upstream | 360506 | 51748697 ~ 51750163 (+) |
| G720466 | NA | non-coding | downstream | 14123 | 52125106 ~ 52125602 (+) |
| G720467 | NA | non-coding | downstream | 15117 | 52126100 ~ 52126533 (+) |
| G720468 | NA | non-coding | downstream | 16431 | 52127414 ~ 52127852 (+) |
| G720472 | NA | non-coding | downstream | 18336 | 52129319 ~ 52129600 (+) |
| G720473 | NA | non-coding | downstream | 18902 | 52129885 ~ 52130114 (+) |
| LOC110530024 | LOC106568723 | other | upstream | 1469503 | 50607401 ~ 50641183 (+) |
| LOC110530019 | LOC106568718 | other | upstream | 1716833 | 50384296 ~ 50397007 (+) |
| LOC118965615 | NA | other | upstream | 2256477 | 49853027 ~ 49854435 (+) |
| G716993 | LOC100136012 | other | upstream | 2563584 | 49546212 ~ 49547085 (+) |
| G716862 | NA | other | upstream | 2776897 | 49332841 ~ 49333772 (+) |
| G721689 | LOC106583873 | other | downstream | 1266249 | 53377232 ~ 53377705 (+) |
| mrpl34 | mrpl34 | other | downstream | 1559413 | 53670348 ~ 53674103 (+) |
| rps28 | NA | other | downstream | 1815234 | 53926018 ~ 53927959 (+) |
| LOC118965528 | LOC106568937 | other | downstream | 2513191 | 54557953 ~ 54670115 (+) |
| LOC110530153 | LOC106568927 | other | downstream | 3023047 | 55120291 ~ 55136638 (+) |
