Gene
RNA
| Item | Value |
|---|---|
| gene id | G721207 |
| gene name | LOC106584099 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 52448383 ~ 52459659 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| serine--pyruvate aminotransferase-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU819406 | False | 8218 | lncRNA | 0.44 | 2 | 52448383 | 52456858 |
| TU819407 | False | 4663 | lncRNA | 0.47 | 8 | 52448383 | 52456858 |
| TU819408 | True | 4746 | lncRNA | 0.46 | 6 | 52448814 | 52459659 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| kif1ab | NA | coding | downstream | 11515 | 52379925 ~ 52436868 (-) |
| LOC110530080 | LOC106568811 | coding | downstream | 85265 | 52352804 ~ 52363118 (-) |
| LOC110530079 | LOC106568768 | coding | downstream | 95688 | 52346057 ~ 52352695 (-) |
| aire | aire | coding | downstream | 104580 | 52328150 ~ 52343803 (-) |
| LOC110530077 | LOC106568766 | coding | downstream | 135088 | 52303487 ~ 52313295 (-) |
| LOC110530083 | LOC106568812 | coding | upstream | 6033 | 52465692 ~ 52475757 (-) |
| trnav-cac-8 | NA | coding | upstream | 24314 | 52483973 ~ 52484045 (-) |
| trnav-aac-10 | NA | coding | upstream | 24516 | 52484175 ~ 52484247 (-) |
| trnav-cac-9 | NA | coding | upstream | 25822 | 52485481 ~ 52485553 (-) |
| trnav-aac-11 | NA | coding | upstream | 26024 | 52485683 ~ 52485755 (-) |
| G721203 | NA | non-coding | downstream | 39155 | 52408868 ~ 52409228 (-) |
| G721149 | LOC100136012 | non-coding | downstream | 156038 | 52291980 ~ 52292345 (-) |
| G721148 | NA | non-coding | downstream | 156463 | 52291672 ~ 52291920 (-) |
| G721110 | dis3l2 | non-coding | downstream | 203091 | 52243208 ~ 52245292 (-) |
| G720563 | NA | non-coding | downstream | 241592 | 52206555 ~ 52206791 (-) |
| G721235 | NA | non-coding | upstream | 23863 | 52483522 ~ 52490403 (-) |
| G721236 | NA | non-coding | upstream | 24398 | 52484057 ~ 52591956 (-) |
| G721237 | NA | non-coding | upstream | 25950 | 52485609 ~ 52538339 (-) |
| trnav-cac-22 | NA | non-coding | upstream | 44030 | 52503689 ~ 52600136 (-) |
| G721243 | NA | non-coding | upstream | 68744 | 52528403 ~ 52589826 (-) |
| LOC110530043 | LOC106568739 | other | downstream | 1189364 | 51252355 ~ 51259061 (-) |
| G719151 | NA | other | downstream | 1508912 | 50936928 ~ 50939471 (-) |
| LOC110530011 | LOC106568709 | other | downstream | 2559131 | 49866272 ~ 49937001 (-) |
| G718489 | NA | other | downstream | 2610687 | 49785674 ~ 49837696 (-) |
| G716488 | NA | other | downstream | 3659421 | 48788521 ~ 48788962 (-) |
| G721275 | NA | other | upstream | 301380 | 52761039 ~ 52761451 (-) |
| LOC110529122 | LOC106568971 | other | upstream | 1003523 | 53462034 ~ 53478913 (-) |
| G722459 | NA | other | upstream | 1038489 | 53495804 ~ 53499730 (-) |
| G722602 | NA | other | upstream | 1343784 | 53803443 ~ 53856065 (-) |
| G722670 | NA | other | upstream | 1466569 | 53926228 ~ 53927959 (-) |
