Gene
RNA
| Item | Value |
|---|---|
| gene id | G721275 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 52761039 ~ 52761451 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrotransposable element Tf2 protein type 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU819491 | True | 413 | TUCP | 0.58 | 1 | 52761039 | 52761451 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530084 | LOC106568816 | coding | downstream | 4437 | 52733010 ~ 52756602 (-) |
| trnav-cac-85 | NA | coding | downstream | 31069 | 52729898 ~ 52729970 (-) |
| trnav-cac-84 | NA | coding | downstream | 34009 | 52726958 ~ 52727030 (-) |
| trnav-cac-83 | NA | coding | downstream | 35594 | 52725373 ~ 52725445 (-) |
| trnav-aac-152 | NA | coding | downstream | 36900 | 52724067 ~ 52724139 (-) |
| selenof | sep15 | coding | upstream | 32294 | 52793317 ~ 52818726 (-) |
| LOC110530090 | LOC106568989 | coding | upstream | 144916 | 52906367 ~ 52917437 (-) |
| LOC110530094 | LOC106568986 | coding | upstream | 187550 | 52949001 ~ 52967823 (-) |
| LOC110530097 | NA | coding | upstream | 238148 | 52999599 ~ 53001669 (-) |
| LOC110530096 | LOC106569026 | coding | upstream | 253727 | 53015178 ~ 53018104 (-) |
| G721260 | NA | non-coding | downstream | 34255 | 52719286 ~ 52726784 (-) |
| G721245 | NA | non-coding | downstream | 92593 | 52533209 ~ 52668446 (-) |
| G721238 | NA | non-coding | downstream | 104450 | 52589219 ~ 52656589 (-) |
| trnav-cac-22 | NA | non-coding | downstream | 160903 | 52503689 ~ 52600136 (-) |
| G721236 | NA | non-coding | downstream | 169083 | 52484057 ~ 52591956 (-) |
| G721288 | NA | non-coding | upstream | 16927 | 52778378 ~ 52778596 (-) |
| G721289 | NA | non-coding | upstream | 17585 | 52779036 ~ 52779473 (-) |
| G721414 | NA | non-coding | upstream | 213346 | 52974797 ~ 52977530 (-) |
| G721425 | LOC106568985 | non-coding | upstream | 225466 | 52986917 ~ 52989556 (-) |
| LOC110530043 | LOC106568739 | other | downstream | 1502020 | 51252355 ~ 51259061 (-) |
| G719151 | NA | other | downstream | 1821568 | 50936928 ~ 50939471 (-) |
| LOC110530011 | LOC106568709 | other | downstream | 2871787 | 49866272 ~ 49937001 (-) |
| G718489 | NA | other | downstream | 2923343 | 49785674 ~ 49837696 (-) |
| G716488 | NA | other | downstream | 3972077 | 48788521 ~ 48788962 (-) |
| LOC110529122 | LOC106568971 | other | upstream | 701731 | 53462034 ~ 53478913 (-) |
| G722459 | NA | other | upstream | 736697 | 53495804 ~ 53499730 (-) |
| G722602 | NA | other | upstream | 1041992 | 53803443 ~ 53856065 (-) |
| G722670 | NA | other | upstream | 1164777 | 53926228 ~ 53927959 (-) |
| G722761 | NA | other | upstream | 1362928 | 54124379 ~ 54139341 (-) |
