G720802


Basic Information

Item Value
gene id G720802
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 52779047 ~ 52779345 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU818901
cctgcgtcttgtgaccgtagcgtacgtgtaggtatgtacggcaggaccaaatcagagagatagataggagcaagcccatgtaatgctttgtaggttagcagtaaaaccttgaaatcagcccttgctttgacaggaagccagtgtagagaggctagcactggagtaatatgataaaaatttttggttctagtcaggattctagcagccgtatttagcactaactgaagtttatttagtgctttatccgggtagccggaaagtagagcattgcagtagtctaacctggaagtgacaaaagc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU818901 True 299 lncRNA 0.44 1 52779047 52779345

Neighbor

gene id symbol gene type direction distance location
LOC110530086 LOC106568992 coding upstream 3688 52771935 ~ 52775359 (+)
trnap-ugg-10 NA coding upstream 13475 52765413 ~ 52765655 (+)
agxtb agxt coding upstream 319430 52448271 ~ 52459617 (+)
LOC110530076 LOC106568765 coding upstream 496654 52255134 ~ 52282393 (+)
dis3l2 dis3l2 coding upstream 530785 52230678 ~ 52248262 (+)
LOC110530088 hs2st coding downstream 39777 52819122 ~ 52851107 (+)
LOC110530089 LOC106568990 coding downstream 77947 52857292 ~ 52904590 (+)
LOC110530091 LOC106568987 coding downstream 154228 52933573 ~ 52939689 (+)
hfm1 LOC106568985 coding downstream 188851 52968196 ~ 52994389 (+)
rpap2 LOC106568983 coding downstream 221815 53001160 ~ 53015071 (+)
G720795 NA non-coding upstream 7875 52770945 ~ 52771172 (+)
G720792 NA non-coding upstream 10588 52768145 ~ 52768459 (+)
G720785 NA non-coding upstream 15911 52762853 ~ 52763136 (+)
G720756 NA non-coding upstream 115984 52662614 ~ 52663063 (+)
G720803 NA non-coding downstream 1752 52781097 ~ 52781301 (+)
G720829 NA non-coding downstream 59489 52838834 ~ 52853293 (+)
ccdc18 LOC106568977 non-coding downstream 339859 53088713 ~ 53121268 (+)
G720979 NA non-coding downstream 348728 53128073 ~ 53128294 (+)
gng12a gbg12 non-coding downstream 411817 53191105 ~ 53251843 (+)
LOC110530024 LOC106568723 other upstream 2137881 50607401 ~ 50641183 (+)
LOC110530019 LOC106568718 other upstream 2385211 50384296 ~ 50397007 (+)
LOC118965615 NA other upstream 2924855 49853027 ~ 49854435 (+)
G716993 LOC100136012 other upstream 3231962 49546212 ~ 49547085 (+)
G716862 NA other upstream 3445275 49332841 ~ 49333772 (+)
G721689 LOC106583873 other downstream 597887 53377232 ~ 53377705 (+)
mrpl34 mrpl34 other downstream 891051 53670348 ~ 53674103 (+)
rps28 NA other downstream 1146872 53926018 ~ 53927959 (+)
LOC118965528 LOC106568937 other downstream 1844829 54557953 ~ 54670115 (+)
LOC110530153 LOC106568927 other downstream 2354685 55120291 ~ 55136638 (+)

Expression


Co-expression Network