G721407


Basic Information

Item Value
gene id G721407
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 53014618 ~ 53100336 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU819632
ataagagacaGCGTGTAAACTTTAAATATTTGATTTAGACATTTACAGCATCAGATTCACTGTATCAAAAGATTCACTCAACTATGCACTAGTGTAAGAATTTATGTTTGAAAACAAGTCTTGTCAGTGATACGGTATGCCTACACAGTCTTCATTTTAGGGAACTACAACATCAAGCACTGTATGTACATTGCCCGAGAGAAGACGAGTCATTATTTGACTCTTAATTTTCAATAACAGAACACAATCAACCAACAAATAGAAAACCGAAAAAGCAACCAAAATAAATATAAAGGATAACCGGACTGACTCC
>TU819631
AAGAAGCCTGCTCAAAGCCAGTAGAAAAAAATATCTAGGGTCTAACACTGGCACAATGACATACAGGAGAAAAGCTTCAAATAAAatgcaacttttttttttttttttttttttttttttaaatagagagAACATCAAGATCCAACTCCACTGCCTGAAGGGGAAAATGGCTTTTTCTGAGAATAACGTAGCACATCCAACACCAAGAGGCATTAACTAGTTGAACTCTTAAAATGAAACAAGGAACTCAGAAGAAACTTTATTTTCCAGAGATAAGTGGAAGAAATGTTATTGgataaacaaatcaacatttttGACCCTGTAGCATAATGGACTGAATTTCAGTATTTTTCAAAACAACCAGTCACATAGGAATGTCTAAATTAATGCTACCATTTTTTTTTATGAACATATCAATGAAATACTTACACCACAAAATGTTCCATCCTATTAATACCTCAATTTTACATTCCACATCTTTGCTGGAGTTCTATGAGCACGTTATACATACAGTGAAGTTACTGCGCATGTCCTGAGTGGGTTCTAGGTGAGCTTGGCTGTACCAGCAGAAGTCTAAGTGCACCGTTGAGGAGAAAGTGAAATAAATAGCACCTGAAATAAAATCAAAGCCTGACTTAAGCAAAAAATATTGTTGTTGCCGTTAATTGATTGAAATACAAAAGCAACCATTTTTTTAGGGTCGAGTTGCATAGGCGGCTATGAGAACTGAATTCAGTTTTTTAAAAGTACAAGGTCCAAGAGCTTTTTGTAGTCAGTGTTCTAACGAACTTATCAATGTCATAAAATACAACAGCAGCCCGACAGAAATGAAGGAACAAAGTCCTAGTTGAGGCGTTTATAAAATGTAAAGGGTAGATTGCGTATGCAAAATACAGCAACGATTTAGATCTTCAGAACATATAGAACACATGTAGGTACATTACACAACCTTTCAAATGTAATAACACGAAGACCTTTAGTCCAACTAAGTTACCGCTTTACACTTGAACTCACTCTTAACATTCCTTCTCACAAGCTCAGCCCTCAAAGCAAATTCACCTCCTTTTAATCATGAATCGTGTGTTCGGGGGGGGGGGAAAAAAGCATTTGACCCCTGTAAGTAAATCTGGACACTTGAACTATAACACAGTGAAAATAAACACTGTTCATAGTGAGATGATTTGCAGAACATGAAGCAGAGGTTCGAGCTAGAGGTTACACGCTTTCAgctgagagagggaaaggagacaaCGCGCATCTCCGCCTCTGTGGATTTGATAAGATCGCCTATCACGTGTTTAGGAGAATGGTTGTACGGTACAACAGGCTGAACTTGATGTGCAATCAAAtccaaattgtaaaaaaaaagggaaaaaaataaatgtactgGACACTGACATGAGTAAATACAAGTAGAAAAGTAAATAGACATAATAAAACTGGTTTGCAGCAGCACAAATCTCTGTCGTTGAGTCCCTCTCAAACATCAACTACTTGCAAACAGGCACACTTGACACACCAGGTCAGGCGCCAAGGCACCCAAACACCATTCAAACCCCCCCTATCTAACCCTTTTACATTCTGCCTAAACTGGTCTCTCACCCCCTTCAGTTCACAAAATCTAAGCAGATCTGAAACACTGAAGTCAACGGGTCACAGAAAAGAGCATATCACTGGACGAAAAGGAAAAACTAAAATAGGGAAACTCAAGCTCCCTCCCTGACCGGGCAACACGGAGGCCCGTTCTCAGAAGGCGAGGGTTAAAAGTGATAATGGCCGTGAAGCCAGTttttttggaggatatattggcacgagTGTTAGGCCCGAGACAAAGTCAAGGGCTGGCAAACGGTGCCAATACATCCTCCGAACtctggcttcgagggcattatcacttttatgcaACAGGTTAACATATTAAAAATGACgatttacatattttcattaacattacttttatgaatttattcataccatttcatccttccacaagatatagtcccgacgcaaatctagggttgctacccaagccggctggtcatcATTGGTTTGGTTGGCAGTCATTACATTTAGTTCTgaatctatggacacgacccagtcgttcgttctaaatgttttATTATCATACTGGCTGGTAACATTCTTATCCCTTACTTGATTGCTAGATTTCACCTGCCGTTGAAAATGTGCTCtcttgtcaggacactgttgttcagaggagctagccaacaacacagcgaacacaataacttcaaactgactgcaaactagctgcacctAGTTTCAtttgacctgttttctattgatatcTCTTCGTATATATCGATAAAAATGATGCGGATTCATGATTTCGACCgactgagaaaagctgcctgcctgtctcatcCCAATTcttgacacgttcattactatgcgaCAGCTGGTGATCGAATCAAATCTACACTGTTGAAAACTAAACGTTAGTCTAAAAGAAAAGTCGCTTGGCTGGGCTGaagagacagtggattgcgcagtcagatggaactgagtaaataggcattttaacatagatttagctggtggtaacttgcGGAATAGACACTGGcaggaatgcggttttaaccaatcaacattcaggattagacccgcTCGTTGTATAATGCTTTATAAGCGCTGTGTAAACACGTAATAAACTACGTAAGCGCTGCGAGACGTTCAGGAGGCAGTGACGCCCTCCCATTCTACCAGGTACTGGACCTTGCCATCCAGGGTGACCCGGCGGGCCAGGACGCGATACTTCTCCCCGCACTCCAGGCCGTGCACTATATCCGTGGAGTGGAGCCCCGGCAAGGTGTTTTGGGGCTCTGGGGCATGGGGGCCTGGGTGTTGAGGGGGAATCGCATGGTTGGGGGGCAGCAGGGGGACCCGTCGTGGCCGGCCCCGTCTTCTCTTCAGGGGGGGCTTGGCAATGGGCCAGTTGCGGCCCG
>TU819633
ataagagacaAAACTTTATTTTCCAGAGATAAGTGGAAGAAATGTTATTGgataaacaaatcaacatttttGACCCTGTAGCATAATGGACTGAATTTCAGTATTTTTCAAAACAACCAGTCACATAGGAATGTCTAAATTAATGCTACCATTTTTTTTTATGAACATATCAATGAAATACTTACACCACAAAATGTTCCATCCTATTAATACCTCAATTTTACATTCCACATCTTTGCTGGAGTTCTATGAGCACGTTATACATACAGTGAAGTTACTGCGCATGTCCTGAGTGGGTTCTAGGTGAGCTTGGCTGTACCAGCAGAAGTCTAAGTGCACCGTTGAGGAGAAAGTGAAATAAATAGCACCTGAAATAAAATCAAAGCCTGACTTAAGCAAAAAATATTGTTGTTGCCGTTAATTGATTGAAATACAAAAGCAACCATTTTTTTAGGGTCGAGTTGCATAGGCGGCTATGAGAACTGAATTCAGTTTTTTAAAAGTACAAGGTCCAAGAGCTTTTTGTAGTCAGTGTTCTAACGAACTTATCAATGTCATAAAATACAACAGCAGCCCGACAGAAATGAAGGAACAAAGTCCTAGTTGAGGCGTTTATAAAATGTAAAGGGTAGATTGCGTATGCAAAATACAGCAACGATTTAGATCTTCAGAACATATAGAACACATGTAGGTACATTACACAACCTTTCAAATGTAATAACACGAAGACCTTTAGTCCAACTAAGTTACCGCTTTACACTTGAACTCACTCTTAACATTCCTTCTCACAAGCTCAGCCCTCAAAGCAAATTCACCTCCTTTTAATCATGAATCGTGTGTTCGGGGGGGGGGGAAAAAAGCATTTGACCCCTGTAAGTAAATCTGGACACTTGAACTATAACACAGTGAAAATAAACACTGTTCATAGTGAGATGATTTGCAGAACATGAAGCAGAGGTTCGAGCTAGAGGTTACACGCTTTCAgctgagagagggaaaggagacaaCGCGCATCTCCGCCTCTGTGGATTTGATAAGATCGCCTATCACGTGTTTAGGAGAATGGTTGTACGGTACAACAGGCTGAACTTGATGTGCAATCAAAtccaaattgtaaaaaaaaagggaaaaaaataaatgtactgGACACTGACATGAGTAAATACAAGTAGAAAAGTAAATAGACATAATAAAACTGGTTTGCAGCAGCACAAATCTCTGTCGTTGAGTCCCTCTCAAACATCAACTACTTGCAAACAGGCACACTTGACACACCAGGTCAGGCGCCAAGGCACCCAAACACCATTCAAACCCCCCCTATCTAACCCTTTTACATTCTGCCTAAACTGGTCTCTCACCCCCTTCAGTTCACAAAATCTAAGCAGATCTGAAACACTGAAGTCAACGGGTCACAGAAAAGAGCATATCACTGGACGAAAAGGAAAAACTAAAATAGGGAAACTCAAGCTCCCTCCCTGACCGGGCAACACGGAGGCCCGTTCTCAGAAGGCGAGGGTTAAAAGTGATAATGGCCGTGAAGCCAGTttttttggaggatatattggcacgagTGTTAGGCCCGAGACAAAGTCAAGGGCTGGCAAACGGTGCCAATACATCCTCCGAACtctggcttcgagggcattatcacttttatgcaACAGGTTAACATATTAAAAATGACgatttacatattttcattaacattacttttatgaatttattcataccatttcatccttccacaagatatagtcccgacgcaaatctagggttgctacccaagccggctggtcatcATTGGTTTGGTTGGCAGTCATTACATTTAGTTCTgaatctatggacacgacccagtcgttcgttctaaatgttttATTATCATACTGGCTGGTAACATTCTTATCCCTTACTTGATTGCTAGATTTCACCTGCCGTTGAAAATGTGCTCtcttgtcaggacactgttgttcagaggagctagccaacaacacagcgaacacaataacttcaaactgactgcaaactagctgcacctAGTTTCAtttgacctgttttctattgatatcTCTTCGTATATATCGATAAAAATGATGCGGATTCATGATTTCGACCgactgagaaaagctgcctgcctgtctcatcCCAATTcttgacacgttcattactatgcgaCAGCTGGTGATCGAATCAAATCTACACTGTTGAAAACTAAACGTTAGTCTAAAAGAAAAGTCGCTTGGCTGGGCTGaagagacagtggattgcgcagtcagatggaactgagtaaataggcattttaacatagatttagctggtggtaacttgcGGAATAGACACTGGcaggaatgcggttttaaccaatcaacattcaggattagacccgcTCGTTGTATAATGCTTTATAAGCGCTGTGTAAACACGTAATAAACTACGTAAGCGCTGCGAGACGTTCAGGAGGCAGTGACGCCCTCCCATTCTACCAGGTACTGGACCTTGCCATCCAGGGTGACCCGGCGGGCCAGGACGCGATACTTCTCCCCGCACTCCAGGCCGTGCACTATATCCGTGGAGTGGAGCCCCGGCAAGGTGTTTTGGGGCTCTGGGGCATGGGGGCCTGGGTGTTGAGGGGGAATCGCATGGTTGGGGGGCAGCAGGGGGACCCGTCGTGGCCGGCCCCGTCTTCTCTTCAGGGGGGGCTTGGCAATGGGCCAGTTGCGGCCCG

Function

NR:

description
metal-response element-binding transcription factor 2 isoform X6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU819632 False 313 lncRNA 0.34 2 53014618 53100336
TU819631 False 2966 lncRNA 0.42 3 53077432 53080513
TU819633 True 2722 lncRNA 0.43 4 53077432 53100336
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110530097 NA coding downstream 12949 52999599 ~ 53001669 (-)
LOC110530094 LOC106568986 coding downstream 46795 52949001 ~ 52967823 (-)
LOC110530090 LOC106568989 coding downstream 97181 52906367 ~ 52917437 (-)
selenof sep15 coding downstream 195911 52793317 ~ 52818726 (-)
LOC110530084 LOC106568816 coding downstream 258016 52733010 ~ 52756602 (-)
LOC110530106 LOC106568974 coding upstream 154861 53255197 ~ 53258515 (-)
nsun4 nsun4 coding upstream 242267 53342603 ~ 53360245 (-)
LOC110529122 LOC106568971 coding upstream 361698 53462034 ~ 53478913 (-)
LOC110530111 LOC106598945 coding upstream 400120 53500456 ~ 53585621 (-)
LOC118965526 NA coding upstream 427267 53527596 ~ 53533919 (-)
G721435 LOC106568983 non-coding downstream 4498 53008689 ~ 53010120 (-)
G721425 LOC106568985 non-coding downstream 25062 52986917 ~ 52989556 (-)
G721414 NA non-coding downstream 37088 52974797 ~ 52977530 (-)
G721289 NA non-coding downstream 235145 52779036 ~ 52779473 (-)
G721509 NA non-coding upstream 24038 53124374 ~ 53124686 (-)
G721464 LOC106568976 non-coding upstream 49157 53149493 ~ 53152132 (-)
G721515 NA non-coding upstream 52341 53152677 ~ 53152971 (-)
G721516 NA non-coding upstream 52787 53153123 ~ 53153362 (-)
G721472 NA non-coding upstream 83386 53183722 ~ 53184178 (-)
G721275 NA other downstream 253167 52761039 ~ 52761451 (-)
LOC110530043 LOC106568739 other downstream 1755599 51252355 ~ 51259061 (-)
G719151 NA other downstream 2075147 50936928 ~ 50939471 (-)
LOC110530011 LOC106568709 other downstream 3125366 49866272 ~ 49937001 (-)
G718489 NA other downstream 3176922 49785674 ~ 49837696 (-)
G722459 NA other upstream 397812 53495804 ~ 53499730 (-)
G722602 NA other upstream 703107 53803443 ~ 53856065 (-)
G722670 NA other upstream 825892 53926228 ~ 53927959 (-)
G722761 NA other upstream 1024043 54124379 ~ 54139341 (-)

Expression

G721407 Expression in all Baseline Samples

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G721407 Expression in each Bioproject

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G721407 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 400.
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Co-expression Network