Item | Value |
---|---|
gene id | G720979 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 53128073 ~ 53128294 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU819086 | True | 222 | lncRNA | 0.38 | 1 | 53128073 | 53128294 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
ccdc18 | LOC106568977 | coding | upstream | 6805 | 53088713 ~ 53121268 (+) |
mtf2 | LOC106568979 | coding | upstream | 47530 | 53070354 ~ 53080543 (+) |
rpl5a | LOC106568981 | coding | upstream | 68507 | 53054537 ~ 53059566 (+) |
LOC118965683 | NA | coding | upstream | 69841 | 53058109 ~ 53058232 (+) |
rpap2 | LOC106568983 | coding | upstream | 113002 | 53001160 ~ 53015071 (+) |
wls | LOC106568975 | coding | downstream | 25587 | 53153881 ~ 53181479 (+) |
gng12a | gbg12 | coding | downstream | 62811 | 53191105 ~ 53251843 (+) |
LOC118965525 | NA | coding | downstream | 130146 | 53258440 ~ 53280342 (+) |
LOC110530108 | LOC106568973 | coding | downstream | 197294 | 53325588 ~ 53336053 (+) |
LOC110530110 | LOC106569025 | coding | downstream | 323854 | 53452148 ~ 53455033 (+) |
G720829 | NA | non-coding | upstream | 274780 | 52838834 ~ 52853293 (+) |
G720803 | NA | non-coding | upstream | 346772 | 52781097 ~ 52781301 (+) |
G720802 | NA | non-coding | upstream | 348728 | 52779047 ~ 52779345 (+) |
G720795 | NA | non-coding | upstream | 356901 | 52770945 ~ 52771172 (+) |
G721056 | NA | non-coding | downstream | 154811 | 53283105 ~ 53283355 (+) |
G721613 | NA | non-coding | downstream | 189809 | 53318103 ~ 53318320 (+) |
G721635 | NA | non-coding | downstream | 207966 | 53336260 ~ 53336461 (+) |
G721639 | NA | non-coding | downstream | 213983 | 53342277 ~ 53342488 (+) |
LOC110530024 | LOC106568723 | other | upstream | 2486907 | 50607401 ~ 50641183 (+) |
LOC110530019 | LOC106568718 | other | upstream | 2734237 | 50384296 ~ 50397007 (+) |
LOC118965615 | NA | other | upstream | 3273881 | 49853027 ~ 49854435 (+) |
G716993 | LOC100136012 | other | upstream | 3580988 | 49546212 ~ 49547085 (+) |
G716862 | NA | other | upstream | 3794301 | 49332841 ~ 49333772 (+) |
G721689 | LOC106583873 | other | downstream | 248938 | 53377232 ~ 53377705 (+) |
mrpl34 | mrpl34 | other | downstream | 542102 | 53670348 ~ 53674103 (+) |
rps28 | NA | other | downstream | 797923 | 53926018 ~ 53927959 (+) |
LOC118965528 | LOC106568937 | other | downstream | 1495880 | 54557953 ~ 54670115 (+) |
LOC110530153 | LOC106568927 | other | downstream | 2005736 | 55120291 ~ 55136638 (+) |