G721843


Basic Information

Item Value
gene id G721843
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 53494782 ~ 53495144 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU820080
gagtttgtcagaatttgtgggtttttgtttgtccacccgcctcgaGGTTTGACATTAATCAACTATAGGAGACTGttctggtgcttgctggactttcttgggcaccctgaagccctcttcacaacaattgaaccgctctccttgaagttcttgatgatctgataagtggttgatttaggtgcaaacttactggcagcaatatccttgcctgtgaagcccttttttgtgcaaagcaatgatgacggcacatgtttccttgcaggtaaccatggttgacagaggaagaacaaggattccaagcaccaccctccttttgaagcttccagtctgttattcaaactcaatcagcatgacagagtgatc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU820080 True 363 lncRNA 0.45 1 53494782 53495144

Neighbor

gene id symbol gene type direction distance location
LOC110530110 LOC106569025 coding upstream 39749 53452148 ~ 53455033 (+)
LOC110530108 LOC106568973 coding upstream 158729 53325588 ~ 53336053 (+)
LOC118965525 NA coding upstream 214440 53258440 ~ 53280342 (+)
gng12a gbg12 coding upstream 245223 53191105 ~ 53251843 (+)
wls LOC106568975 coding upstream 313303 53153881 ~ 53181479 (+)
mrpl34 mrpl34 coding downstream 175204 53670348 ~ 53674103 (+)
LOC110530115 LOC106568965 coding downstream 179336 53674480 ~ 53680005 (+)
LOC110530118 LOC106568961 coding downstream 249384 53744528 ~ 53767156 (+)
rps28 NA coding downstream 430874 53926018 ~ 53927959 (+)
LOC110530122 LOC106568957 coding downstream 460059 53955203 ~ 53962940 (+)
G721833 NA non-coding upstream 7546 53486984 ~ 53487236 (+)
G721790 NA non-coding upstream 32120 53462423 ~ 53462662 (+)
G721751 NA non-coding upstream 59909 53434644 ~ 53434873 (+)
G721750 NA non-coding upstream 60352 53434204 ~ 53434430 (+)
G721703 NA non-coding upstream 106917 53387610 ~ 53387865 (+)
G721846 NA non-coding downstream 661 53495805 ~ 53496231 (+)
G721845 NA non-coding downstream 1180 53496324 ~ 53497920 (+)
G721844 NA non-coding downstream 4316 53499460 ~ 53499760 (+)
G721913 NA non-coding downstream 121830 53616974 ~ 53617219 (+)
G721928 NA non-coding downstream 135762 53630906 ~ 53631386 (+)
G721689 LOC106583873 other upstream 117077 53377232 ~ 53377705 (+)
LOC110530024 LOC106568723 other upstream 2853616 50607401 ~ 50641183 (+)
LOC110530019 LOC106568718 other upstream 3100946 50384296 ~ 50397007 (+)
LOC118965615 NA other upstream 3640590 49853027 ~ 49854435 (+)
G716993 LOC100136012 other upstream 3947697 49546212 ~ 49547085 (+)
LOC118965528 LOC106568937 other downstream 1129030 54557953 ~ 54670115 (+)
LOC110530153 LOC106568927 other downstream 1638886 55120291 ~ 55136638 (+)
LOC110530939 LOC106568914 other downstream 1964552 55457870 ~ 55461071 (+)

Expression


Co-expression Network