Gene
RNA
| Item | Value |
|---|---|
| gene id | G722523 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 53677925 ~ 53679995 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: DET1- and DDB1-associated protein 1-like |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU820840 | True | 1720 | lncRNA | 0.40 | 2 | 53677925 | 53679995 |
53,674,400
53,674,800
53,675,200
53,675,600
53,676,000
53,676,400
53,676,800
53,677,200
53,677,600
53,678,000
53,678,400
53,678,800
53,679,200
53,679,600
53,680,000
53,680,400
53,680,800
53,681,200
53,681,600
53,682,000
53,682,400
NC_048572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530114 | LOC106568966 | coding | downstream | 17919 | 53635788 ~ 53709367 (-) |
| LOC110530113 | LOC106598949 | coding | downstream | 42333 | 53599635 ~ 53635592 (-) |
| LOC110530111 | LOC106598945 | coding | downstream | 92304 | 53500456 ~ 53585621 (-) |
| LOC118965526 | NA | coding | downstream | 146991 | 53527596 ~ 53533919 (-) |
| LOC110529122 | LOC106568971 | coding | downstream | 199012 | 53462034 ~ 53478913 (-) |
| LOC110530116 | tm16h | coding | upstream | 1613 | 53681608 ~ 53712234 (-) |
| trnak-cuu-2 | NA | coding | upstream | 16633 | 53696628 ~ 53696700 (-) |
| plvapa | LOC106568963 | coding | upstream | 42177 | 53722172 ~ 53728671 (-) |
| ocel1 | LOC106568960 | coding | upstream | 126668 | 53806663 ~ 53812192 (-) |
| LOC110530934 | LOC106568959 | coding | upstream | 138711 | 53818706 ~ 53880785 (-) |
| G722488 | NA | non-coding | downstream | 82152 | 53595556 ~ 53595773 (-) |
| G722459 | NA | non-coding | downstream | 180498 | 53495804 ~ 53499730 (-) |
| G721825 | NA | non-coding | downstream | 196800 | 53480893 ~ 53481125 (-) |
| G722612 | NA | non-coding | upstream | 148684 | 53828679 ~ 53829059 (-) |
| G722659 | NA | non-coding | upstream | 225153 | 53905148 ~ 53905462 (-) |
| G722686 | NA | non-coding | upstream | 264599 | 53944594 ~ 53944946 (-) |
| G722694 | NA | non-coding | upstream | 272200 | 53952195 ~ 53952400 (-) |
| G721275 | NA | other | downstream | 916474 | 52761039 ~ 52761451 (-) |
| LOC110530043 | LOC106568739 | other | downstream | 2418906 | 51252355 ~ 51259061 (-) |
| G719151 | NA | other | downstream | 2738454 | 50936928 ~ 50939471 (-) |
| G722602 | NA | other | upstream | 123448 | 53803443 ~ 53856065 (-) |
| G722670 | NA | other | upstream | 246233 | 53926228 ~ 53927959 (-) |
| G722761 | NA | other | upstream | 444384 | 54124379 ~ 54139341 (-) |
| G722854 | NA | other | upstream | 571119 | 54251114 ~ 54251546 (-) |
| G722864 | LOC106581475 | other | upstream | 601690 | 54281685 ~ 54281978 (-) |
