Gene
RNA
| Item | Value |
|---|---|
| gene id | G722612 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 53828679 ~ 53829059 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU820960 | True | 301 | lncRNA | 0.38 | 2 | 53828679 | 53829059 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ocel1 | LOC106568960 | coding | downstream | 16487 | 53806663 ~ 53812192 (-) |
| plvapa | LOC106568963 | coding | downstream | 100008 | 53722172 ~ 53728671 (-) |
| LOC110530116 | tm16h | coding | downstream | 116445 | 53681608 ~ 53712234 (-) |
| trnak-cuu-2 | NA | coding | downstream | 131979 | 53696628 ~ 53696700 (-) |
| LOC110530114 | LOC106568966 | coding | downstream | 168673 | 53635788 ~ 53709367 (-) |
| insl3 | NA | coding | upstream | 85761 | 53914820 ~ 53917617 (-) |
| LOC110530121 | LOC106568956 | coding | upstream | 136938 | 53965997 ~ 53995304 (-) |
| LOC110530123 | rps15 | coding | upstream | 172070 | 54001129 ~ 54003188 (-) |
| LOC118965682 | NA | coding | upstream | 173375 | 54002434 ~ 54002567 (-) |
| cnn2 | cnn2 | coding | upstream | 179375 | 54008434 ~ 54014434 (-) |
| LOC110530934 | LOC106568959 | non-coding | downstream | 198 | 53818706 ~ 53880785 (-) |
| G722523 | NA | non-coding | downstream | 148684 | 53677925 ~ 53679995 (-) |
| G722488 | NA | non-coding | downstream | 232906 | 53595556 ~ 53595773 (-) |
| LOC118965526 | NA | non-coding | downstream | 294760 | 53527596 ~ 53533919 (-) |
| G722659 | NA | non-coding | upstream | 76089 | 53905148 ~ 53905462 (-) |
| G722686 | NA | non-coding | upstream | 115535 | 53944594 ~ 53944946 (-) |
| G722694 | NA | non-coding | upstream | 123136 | 53952195 ~ 53952400 (-) |
| G722696 | NA | non-coding | upstream | 125138 | 53954197 ~ 53954429 (-) |
| G722699 | NA | non-coding | upstream | 136117 | 53965176 ~ 53965407 (-) |
| G722459 | NA | other | downstream | 328949 | 53495804 ~ 53499730 (-) |
| LOC110529122 | LOC106568971 | other | downstream | 364915 | 53462034 ~ 53478913 (-) |
| G721275 | NA | other | downstream | 1067228 | 52761039 ~ 52761451 (-) |
| LOC110530043 | LOC106568739 | other | downstream | 2569660 | 51252355 ~ 51259061 (-) |
| G719151 | NA | other | downstream | 2889208 | 50936928 ~ 50939471 (-) |
| G722670 | NA | other | upstream | 97169 | 53926228 ~ 53927959 (-) |
| G722761 | NA | other | upstream | 295320 | 54124379 ~ 54139341 (-) |
| G722854 | NA | other | upstream | 422055 | 54251114 ~ 54251546 (-) |
| G722864 | LOC106581475 | other | upstream | 452626 | 54281685 ~ 54281978 (-) |
| G723955 | NA | other | upstream | 1548222 | 55377281 ~ 55377776 (-) |
