Gene
RNA
| Item | Value |
|---|---|
| gene id | G722814 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 54189392 ~ 54243058 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| microtubule-associated serine/threonine-protein kinase 3-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU821176 | True | 309 | lncRNA | 0.55 | 3 | 54189392 | 54243058 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530126 | LOC106569003 | coding | downstream | 57653 | 54127068 ~ 54131739 (-) |
| LOC110530125 | LOC106568953 | coding | downstream | 83982 | 54058122 ~ 54105410 (-) |
| crsp7 | LOC106568954 | coding | downstream | 149820 | 54024736 ~ 54039572 (-) |
| cnn2 | cnn2 | coding | downstream | 174958 | 54008434 ~ 54014434 (-) |
| LOC118965682 | NA | coding | downstream | 186825 | 54002434 ~ 54002567 (-) |
| LOC110530134 | LOC106568945 | coding | upstream | 131175 | 54374233 ~ 54377574 (-) |
| LOC110530139 | LOC100194659 | coding | upstream | 200072 | 54443130 ~ 54445222 (-) |
| LOC110530140 | LOC106568942 | coding | upstream | 203161 | 54446219 ~ 54465716 (-) |
| LOC110530141 | LOC106568941 | coding | upstream | 234867 | 54477925 ~ 54485773 (-) |
| LOC110530142 | LOC106568939 | coding | upstream | 255305 | 54498363 ~ 54507488 (-) |
| G722812 | NA | non-coding | downstream | 178 | 54188069 ~ 54189214 (-) |
| G722805 | LOC106568951 | non-coding | downstream | 3860 | 54180442 ~ 54185532 (-) |
| G722728 | NA | non-coding | downstream | 154670 | 54033291 ~ 54034722 (-) |
| G722699 | NA | non-coding | downstream | 223985 | 53965176 ~ 53965407 (-) |
| G722696 | NA | non-coding | downstream | 234963 | 53954197 ~ 53954429 (-) |
| G722849 | NA | non-coding | upstream | 4014 | 54247072 ~ 54247859 (-) |
| G722853 | NA | non-coding | upstream | 9087 | 54252145 ~ 54252842 (-) |
| G722852 | NA | non-coding | upstream | 11104 | 54254162 ~ 54254404 (-) |
| G722860 | NA | non-coding | upstream | 20681 | 54263739 ~ 54263859 (-) |
| G722863 | NA | non-coding | upstream | 29718 | 54272776 ~ 54273055 (-) |
| G722761 | NA | other | downstream | 50051 | 54124379 ~ 54139341 (-) |
| G722670 | NA | other | downstream | 261433 | 53926228 ~ 53927959 (-) |
| G722602 | NA | other | downstream | 333327 | 53803443 ~ 53856065 (-) |
| G722459 | NA | other | downstream | 689662 | 53495804 ~ 53499730 (-) |
| LOC110529122 | LOC106568971 | other | downstream | 725628 | 53462034 ~ 53478913 (-) |
| G722854 | NA | other | upstream | 8056 | 54251114 ~ 54251546 (-) |
| G722864 | LOC106581475 | other | upstream | 38627 | 54281685 ~ 54281978 (-) |
| G723955 | NA | other | upstream | 1134223 | 55377281 ~ 55377776 (-) |
| G723966 | NA | other | upstream | 1153566 | 55396624 ~ 55396885 (-) |
| G724287 | LOC106568908 | other | upstream | 1392480 | 55635538 ~ 55646014 (-) |
