G722773 (LOC106568951)


Basic Information

Item Value
gene id G722773
gene name LOC106568951
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 54204688 ~ 54207815 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU821132
TCTGCCATTAATTTATTTCAAAATGCTGTTAGAGCGTATAAAGCAATGGATTTCACACCAACTTTCACCAGAAACCAGTTTGAGAAATATGAAATGAAGTTGTTCGAGGGCCACCAAGGTAAAAGACAGAACAAAACAATGTGAATTATCTATATGAATTACAATTGACCACCCGTGTGACGAAATCAACATTAGATGTCCCCTTTTCCATATACAGTATCAGGAAAAATGTGAGAGTATCATCATCTTAAGTGTTATTGAAGTCGAATTGGAAaagaaaatggaaaaaaaatgaATACAATTCAGTGACGTAAACAATGTACACGAACAAATTTGGGTGccagtgttttttttgtgtaacATTGAACAGTGTAGAAATGCAGAATGGTTATGTTCACAATCGTGGTCAGCTTAGCCATACTGTAAGAATCAGACAAATTCTCTAGCAAGCTAGACCATGGAAATATCTGACAAATTGAACATGTAGTTATTCAGTAAAAATGTCTAGTATGATTACACCGTAGCAAGATGCAGTATTTCCAACAAACGGACCACATTGACAATAATCAAGATCTGGGAAATACATTGTAAATTGAATTACTTATTTGATTATATCCTCAAGAAACACATGTTTCAAGTACTAATTAAGTAAACAATGTTGGGTAATAAAACAAGTAGATCAGTTTTAGATTTGACCTTGCGCTATCCTCTCTCGTTCAAGTATTAGTTGGTGCTAAATTATTATTTTAACCCTTGTCAATATTCCCACCGTGAAACACGTGTTCCTAACATCTGACAGAGTATGACAGTTCATCCTGATATTACAGCTTATTTGAAATAAGCGAGAGTGGAAGCATTTGTTAATTCCATAGTTGCAGAAGAAAACAATGTGCCAATGAGAGTATACAAAGTTCAGAGCAAAACCATCTTCAAATCTCTCACCAAACCACTGTCATTCTATCAAGTCTgctgttcaccccccccccccaagtcacTTTTTAATCATTTCCAACTGCCGTTTAGATTagttacggtgtgtgtgtgaatagcaTAGGCGAATCAGCAATACAACAAGACTGCTTCCATGtcaaaatatacacacacaaaaaacatttcAATTTGTCCCTCAGGGCTTCTGTTGGAATCCTGCCGTTTACCGTCATTGGTTGTAGTAATTTAACAGCAGATGGAAAAACTTCAAATACAGTAcacttgaccccaaaaaatgtaaacattCATATAACATGGTTAAAAACCGCAAAGAGAGCCAGTTCCTACATACACTGTACGATTCTTAAACCAGGGTTCTGAAAAATAACGAGAACTGCGTTAAGAGGAAATGCCTAACCTTTACAAACGCTCTCCTGCTAAATTAGATTGTAGGGTAGCTTGCTTCAACAAGCAGGTAAGTACGGCATTGCAGGATCGCCAACAATCTAGTATCAAAAAGGTAGTAAAGGCAGAACTTAATTTATTTTGTCAATCATTTTGTGATTTAAACCAATGAGAGAATTGGTGGAATCCATTTGATGATTTCACTGGATGATTGACAGGGCATGGCAGCAGGGCCCCATTCCTAAAGCCTCCTATGTACACTAcctcttctctttcttttttAGAAGGGTTCCTATGAGAAATCCCCGCTTTGGCATGGGGGCACCATTTCAAAGCATACCGAATGTAGATACCTTTCATACTTGTGCCCAGGTCTTTTAAAACGTGACACACTTTCCCTGATTCTCTTGGATCCAGTCCAGATAGTGACTACAAATCATTACCAAACACATTGTTCTAGTGTGTTAAAAGACAGCACTGAATTAAAAAGGGCTTGGACACAGTAAGTACATAAACATTCAACATGTGTTTGAAAGGCCATATTTGATCAGACAAAAATCAGCAGCCATTTTCCAAGAAATTAAACACTTTTGGAATACTAAAATGTTACCCAACTTAAAATTTAAGAGATAATGGACAAAGAAATTGCTTCATCCTCTGTCTCCATCTAGAAACCACATCTAAAACATTTGTTCTTAATTTAGTTTCCTCAAGTCCCTATCAATTCACACAACAGAATGGCTGCACCTCATTTGTGCGATTTACACAAATAGGGCCAATAATACATGACGTCATATTCAGCCctgaaataaaaacaaatgaaCATTAAAAAGTCATGAATAGGTTATTTcagttaaaaaaaagaaaaacaaatttAAAACATATTTACAAAGTACAAACATGTTACAGGTGCTACAGTGAACCTAAAACCAAAGGGTGAAGGAGGGGGAAACCAAAAATAGGATGTAAACCAATTTTGGCACTCAAAAGTTTGTTTAGTGTGGTAGGATGCATACTGTAACGTTAACTCGACTATGTAACAACATTATTTTTGTTCTTCTCTCCCTCCGGTTGCCTCGATTGGCACAACTTGAGTATATACTTGCGGATAAACATGCAAGCCCTTCAAATACTGTACAGTAGTCGATAAGAGTATGTAACCTTAGTCTAGAGTCTTGCTGTCTTGAGAAAGACTCTACCTTTCACCTTTTTGGAGCAACGCTAGGCtaaaacccctccctctcttttggTTTGGATTTCTGTGCTGCTGTACCCTGTGCTCCTCTCCCCGCAGCCTCCAGGCTCCAGTCGGACTGAGCCAAGTTAATCCACGATGCCTTAAACCGCGGCTGCCTGACGGGGAGGGTGGCTCTTGGCTCCTTCTCATTTGGGTCGTCAAAGCTCACCTCCTGCACCGCCTTCTGCTTCTTAAAGGAGTCCCTCCTCTCGGACAGGGCCAGTTTCCTCATCACCAACTCCTTGGAGCAGTGGTCACTGCGGTGGTCGCTGCTTGTCGACTCCCTGTGGATTCTCTGACCGCCCAGATACAGGCCCTGGCGGCCATGTTGTTCCCCCACACAGACAAACCCTCTGGCCGTATCCAGGTCCTctagcccctccccctccgaCAGAGGTACCTCCATGGTGTGTCGGCGGGTGGCGTAGCCCTTCTTGTCACCGTGGTACGCCCCGGAGAGCTTCTCAGCCGACTGCACCCTCTTGAGGAGGGGAGAGCGGGGCGGCTCGGCGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU821132 True 3085 lncRNA 0.41 2 54204688 54207815

Neighbor

gene id symbol gene type direction distance location
LOC110530126 LOC106569003 coding downstream 72949 54127068 ~ 54131739 (-)
LOC110530125 LOC106568953 coding downstream 99278 54058122 ~ 54105410 (-)
crsp7 LOC106568954 coding downstream 165116 54024736 ~ 54039572 (-)
cnn2 cnn2 coding downstream 190254 54008434 ~ 54014434 (-)
LOC118965682 NA coding downstream 202121 54002434 ~ 54002567 (-)
LOC110530134 LOC106568945 coding upstream 166418 54374233 ~ 54377574 (-)
LOC110530139 LOC100194659 coding upstream 235315 54443130 ~ 54445222 (-)
LOC110530140 LOC106568942 coding upstream 238404 54446219 ~ 54465716 (-)
LOC110530141 LOC106568941 coding upstream 270110 54477925 ~ 54485773 (-)
LOC110530142 LOC106568939 coding upstream 290548 54498363 ~ 54507488 (-)
G722812 NA non-coding downstream 15474 54188069 ~ 54189214 (-)
G722805 LOC106568951 non-coding downstream 19156 54180442 ~ 54185532 (-)
G722728 NA non-coding downstream 169966 54033291 ~ 54034722 (-)
G722699 NA non-coding downstream 239281 53965176 ~ 53965407 (-)
G722696 NA non-coding downstream 250259 53954197 ~ 53954429 (-)
G722849 NA non-coding upstream 39257 54247072 ~ 54247859 (-)
G722853 NA non-coding upstream 44330 54252145 ~ 54252842 (-)
G722852 NA non-coding upstream 46347 54254162 ~ 54254404 (-)
G722860 NA non-coding upstream 55924 54263739 ~ 54263859 (-)
G722863 NA non-coding upstream 64961 54272776 ~ 54273055 (-)
G722761 NA other downstream 65347 54124379 ~ 54139341 (-)
G722670 NA other downstream 276729 53926228 ~ 53927959 (-)
G722602 NA other downstream 348623 53803443 ~ 53856065 (-)
G722459 NA other downstream 704958 53495804 ~ 53499730 (-)
LOC110529122 LOC106568971 other downstream 740924 53462034 ~ 53478913 (-)
G722854 NA other upstream 43299 54251114 ~ 54251546 (-)
G722864 LOC106581475 other upstream 73870 54281685 ~ 54281978 (-)
G723955 NA other upstream 1169466 55377281 ~ 55377776 (-)
G723966 NA other upstream 1188809 55396624 ~ 55396885 (-)
G724287 LOC106568908 other upstream 1427723 55635538 ~ 55646014 (-)

Expression

G722773(LOC106568951) Expression in all Baseline Samples

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G722773(LOC106568951) Expression in each Bioproject

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G722773(LOC106568951) Expression in each Sample
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Co-expression Network