G722334


Basic Information

Item Value
gene id G722334
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 54505382 ~ 54507445 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU820621
gcagctttgcacactcttggcattctcaaccagcttcatgaggtagtcACCGTAGCCACCAGCAAGCTCTCCCTGGCCTTAGTtagctatttagctagctagctgtatgaGATGACATTGACATTTAACCAAAACGATGGTTCGGGAAGAATACAAAAAACAACGACAAGCCGTGTATCTGCTCCATTGTTGGCCGGATCATTTACTTGTTTGTAGCAGTCTCCTCACAGAAACGGTGTAACTTGGACAAATTTGTGACAGCTAGCTTGTTAACATTTTTACACTGGCTGGCTAACATCTATCAGCTGTGCACTGCTGTATCATTATGGTCCAagctatccgggatccttgggacgtccctatcAAAGATTTGTTTCACTcgctaacccaagatagaccagcG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU820621 True 403 lncRNA 0.45 2 54505382 54507445

Neighbor

gene id symbol gene type direction distance location
rb11a rb11a coding upstream 7415 54488934 ~ 54497967 (+)
LOC110530137 LOC106568943 coding upstream 63304 54407457 ~ 54442078 (+)
LOC110530135 LOC106568944 coding upstream 102039 54392338 ~ 54403343 (+)
LOC110530136 pgpi coding upstream 113306 54385550 ~ 54392076 (+)
LOC110530133 LOC106599022 coding upstream 129997 54356014 ~ 54375385 (+)
LOC110530143 LOC106568938 coding downstream 18981 54526426 ~ 54556133 (+)
LOC118965528 LOC106568937 coding downstream 50508 54557953 ~ 54670115 (+)
LOC110530145 LOC106568934 coding downstream 492417 54999862 ~ 55003924 (+)
LOC110530147 rbp2 coding downstream 500572 55008017 ~ 55010157 (+)
LOC110530146 LOC106569002 coding downstream 503460 55010905 ~ 55025208 (+)
G722358 NA non-coding upstream 25837 54475687 ~ 54479545 (+)
pde4ca LOC106568947 non-coding upstream 197968 54287115 ~ 54347017 (+)
LOC110530129 LOC106568949 non-coding upstream 235315 54211906 ~ 54270087 (+)
G722271 NA non-coding upstream 245283 54259383 ~ 54260099 (+)
LOC110530128 LOC106568951 non-coding upstream 297561 54140181 ~ 54207822 (+)
G722369 NA non-coding downstream 6883 54514328 ~ 54514544 (+)
G722370 NA non-coding downstream 8835 54516280 ~ 54516595 (+)
G723092 NA non-coding downstream 163915 54671360 ~ 54671582 (+)
G723115 NA non-coding downstream 187607 54695052 ~ 54695285 (+)
G723112 NA non-coding downstream 191418 54698863 ~ 54701655 (+)
rps28 NA other upstream 577423 53926018 ~ 53927959 (+)
mrpl34 mrpl34 other upstream 833523 53670348 ~ 53674103 (+)
G721689 LOC106583873 other upstream 1127677 53377232 ~ 53377705 (+)
LOC110530024 LOC106568723 other upstream 3864216 50607401 ~ 50641183 (+)
LOC110530019 LOC106568718 other upstream 4111546 50384296 ~ 50397007 (+)
LOC110530153 LOC106568927 other downstream 626585 55120291 ~ 55136638 (+)
LOC110530939 LOC106568914 other downstream 952251 55457870 ~ 55461071 (+)
si:ch211-267e7.3 LOC106568906 other downstream 1202795 55710156 ~ 55724271 (+)
G725573 NA other downstream 2476125 56983570 ~ 56984285 (+)

Expression


Co-expression Network