Gene
RNA
| Item | Value |
|---|---|
| gene id | G722369 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 54514328 ~ 54514544 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU820666 | True | 217 | lncRNA | 0.34 | 1 | 54514328 | 54514544 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rb11a | rb11a | coding | upstream | 16361 | 54488934 ~ 54497967 (+) |
| LOC110530137 | LOC106568943 | coding | upstream | 72250 | 54407457 ~ 54442078 (+) |
| LOC110530135 | LOC106568944 | coding | upstream | 110985 | 54392338 ~ 54403343 (+) |
| LOC110530136 | pgpi | coding | upstream | 122252 | 54385550 ~ 54392076 (+) |
| LOC110530133 | LOC106599022 | coding | upstream | 138943 | 54356014 ~ 54375385 (+) |
| LOC110530143 | LOC106568938 | coding | downstream | 11882 | 54526426 ~ 54556133 (+) |
| LOC118965528 | LOC106568937 | coding | downstream | 43409 | 54557953 ~ 54670115 (+) |
| LOC110530145 | LOC106568934 | coding | downstream | 485318 | 54999862 ~ 55003924 (+) |
| LOC110530147 | rbp2 | coding | downstream | 493473 | 55008017 ~ 55010157 (+) |
| LOC110530146 | LOC106569002 | coding | downstream | 496361 | 55010905 ~ 55025208 (+) |
| G722334 | NA | non-coding | upstream | 6883 | 54505382 ~ 54507445 (+) |
| G722358 | NA | non-coding | upstream | 34783 | 54475687 ~ 54479545 (+) |
| pde4ca | LOC106568947 | non-coding | upstream | 206914 | 54287115 ~ 54347017 (+) |
| LOC110530129 | LOC106568949 | non-coding | upstream | 244261 | 54211906 ~ 54270087 (+) |
| G722271 | NA | non-coding | upstream | 254229 | 54259383 ~ 54260099 (+) |
| G722370 | NA | non-coding | downstream | 1736 | 54516280 ~ 54516595 (+) |
| G723092 | NA | non-coding | downstream | 156816 | 54671360 ~ 54671582 (+) |
| G723115 | NA | non-coding | downstream | 180508 | 54695052 ~ 54695285 (+) |
| G723112 | NA | non-coding | downstream | 184319 | 54698863 ~ 54701655 (+) |
| G723210 | NA | non-coding | downstream | 323224 | 54837768 ~ 54867601 (+) |
| rps28 | NA | other | upstream | 586369 | 53926018 ~ 53927959 (+) |
| mrpl34 | mrpl34 | other | upstream | 842469 | 53670348 ~ 53674103 (+) |
| G721689 | LOC106583873 | other | upstream | 1136623 | 53377232 ~ 53377705 (+) |
| LOC110530024 | LOC106568723 | other | upstream | 3873162 | 50607401 ~ 50641183 (+) |
| LOC110530019 | LOC106568718 | other | upstream | 4120492 | 50384296 ~ 50397007 (+) |
| LOC110530153 | LOC106568927 | other | downstream | 619486 | 55120291 ~ 55136638 (+) |
| LOC110530939 | LOC106568914 | other | downstream | 945152 | 55457870 ~ 55461071 (+) |
| si:ch211-267e7.3 | LOC106568906 | other | downstream | 1195696 | 55710156 ~ 55724271 (+) |
| G725573 | NA | other | downstream | 2469026 | 56983570 ~ 56984285 (+) |
