G723525


Basic Information

Item Value
gene id G723525
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 55030154 ~ 55030524 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU821938
gtcctagcttcagggggaagctggtttcACCATTGGGGTGctaggacagagaagagctttgactgggctgagcgtAGGGGtcggagggccaagagaccagagatGGCGGAACAGAgtagtagggttagggtgtagggtgacaTCCTAGGTCCAGCAGTAACTtagagggaagtagctagatagtgtagcTAATATCAGGGTGACTGCTAAAGCAAATGTATTGCCTTTGTATTCCGATAAAAACTGAAAAGTTCTGAACACTCACAAGTCCCAACTTCAGCAGACAAGTATCAAATTCTTGCTGAAGTTTCTAGCCGGAAGCATAAACTAGCTAGTTGGGGAAGGCTCATTAAACTAAATCCATTCATCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU821938 True 371 lncRNA 0.47 1 55030154 55030524

Neighbor

gene id symbol gene type direction distance location
LOC110530146 LOC106569002 coding upstream 4946 55010905 ~ 55025208 (+)
LOC110530147 rbp2 coding upstream 19997 55008017 ~ 55010157 (+)
LOC110530145 LOC106568934 coding upstream 26230 54999862 ~ 55003924 (+)
LOC118965528 LOC106568937 coding upstream 360039 54557953 ~ 54670115 (+)
LOC110530143 LOC106568938 coding upstream 474021 54526426 ~ 54556133 (+)
LOC110530148 LOC106568930 coding downstream 8494 55039018 ~ 55062662 (+)
ap2m1 ap2m1 coding downstream 34206 55064730 ~ 55072215 (+)
LOC110530151 LOC106599070 coding downstream 71920 55102444 ~ 55106033 (+)
LOC110530153 LOC106568927 coding downstream 89767 55120291 ~ 55136638 (+)
otol1a LOC106569022 coding downstream 153903 55184427 ~ 55190256 (+)
G723294 NA non-coding upstream 27921 55001969 ~ 55002233 (+)
G723210 NA non-coding upstream 162553 54837768 ~ 54867601 (+)
G723112 NA non-coding upstream 328499 54698863 ~ 54701655 (+)
G723115 NA non-coding upstream 334869 54695052 ~ 54695285 (+)
G723092 NA non-coding upstream 358572 54671360 ~ 54671582 (+)
G723543 NA non-coding downstream 43305 55073829 ~ 55074170 (+)
G723539 NA non-coding downstream 55447 55085971 ~ 55101530 (+)
G723563 NA non-coding downstream 78087 55108611 ~ 55108957 (+)
G723601 NA non-coding downstream 150592 55181116 ~ 55181330 (+)
G723606 NA non-coding downstream 155764 55186288 ~ 55186501 (+)
rps28 NA other upstream 1102195 53926018 ~ 53927959 (+)
mrpl34 mrpl34 other upstream 1358295 53670348 ~ 53674103 (+)
G721689 LOC106583873 other upstream 1652449 53377232 ~ 53377705 (+)
LOC110530024 LOC106568723 other upstream 4388988 50607401 ~ 50641183 (+)
LOC110530939 LOC106568914 other downstream 429172 55457870 ~ 55461071 (+)
si:ch211-267e7.3 LOC106568906 other downstream 679716 55710156 ~ 55724271 (+)
G725573 NA other downstream 1953046 56983570 ~ 56984285 (+)
LOC110530213 LOC106568871 other downstream 2438348 57421244 ~ 57478855 (+)

Expression


Co-expression Network