Gene
RNA
| Item | Value |
|---|---|
| gene id | G723601 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 55181116 ~ 55181330 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU822028 | True | 215 | lncRNA | 0.42 | 1 | 55181116 | 55181330 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530153 | LOC106568927 | coding | upstream | 44478 | 55120291 ~ 55136638 (+) |
| LOC110530151 | LOC106599070 | coding | upstream | 75083 | 55102444 ~ 55106033 (+) |
| ap2m1 | ap2m1 | coding | upstream | 108901 | 55064730 ~ 55072215 (+) |
| LOC110530148 | LOC106568930 | coding | upstream | 118454 | 55039018 ~ 55062662 (+) |
| LOC110530146 | LOC106569002 | coding | upstream | 155908 | 55010905 ~ 55025208 (+) |
| otol1a | LOC106569022 | coding | downstream | 3097 | 55184427 ~ 55190256 (+) |
| LOC110530158 | LOC106568923 | coding | downstream | 42228 | 55223558 ~ 55261073 (+) |
| lrrcc1 | lrrcc1 | coding | downstream | 88927 | 55270257 ~ 55293244 (+) |
| e2f5 | LOC106568921 | coding | downstream | 117800 | 55299130 ~ 55304474 (+) |
| si:ch211-106h4.9 | LOC106568916 | coding | downstream | 153502 | 55334832 ~ 55415215 (+) |
| G723563 | NA | non-coding | upstream | 72159 | 55108611 ~ 55108957 (+) |
| G723539 | NA | non-coding | upstream | 79586 | 55085971 ~ 55101530 (+) |
| G723543 | NA | non-coding | upstream | 106946 | 55073829 ~ 55074170 (+) |
| G723525 | NA | non-coding | upstream | 150592 | 55030154 ~ 55030524 (+) |
| G723294 | NA | non-coding | upstream | 178883 | 55001969 ~ 55002233 (+) |
| G723606 | NA | non-coding | downstream | 4958 | 55186288 ~ 55186501 (+) |
| G723604 | NA | non-coding | downstream | 21535 | 55202865 ~ 55203789 (+) |
| G723662 | NA | non-coding | downstream | 132602 | 55313932 ~ 55332467 (+) |
| G723650 | NA | non-coding | downstream | 154286 | 55335616 ~ 55337587 (+) |
| LOC118965528 | LOC106568937 | other | upstream | 511002 | 54557953 ~ 54670115 (+) |
| rps28 | NA | other | upstream | 1253157 | 53926018 ~ 53927959 (+) |
| mrpl34 | mrpl34 | other | upstream | 1509257 | 53670348 ~ 53674103 (+) |
| G721689 | LOC106583873 | other | upstream | 1803411 | 53377232 ~ 53377705 (+) |
| LOC110530939 | LOC106568914 | other | downstream | 278366 | 55457870 ~ 55461071 (+) |
| si:ch211-267e7.3 | LOC106568906 | other | downstream | 528910 | 55710156 ~ 55724271 (+) |
| G725573 | NA | other | downstream | 1802240 | 56983570 ~ 56984285 (+) |
| LOC110530213 | LOC106568871 | other | downstream | 2287542 | 57421244 ~ 57478855 (+) |
| G725878 | NA | other | downstream | 2332276 | 57513606 ~ 57515394 (+) |
