G723700


Basic Information

Item Value
gene id G723700
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 55395553 ~ 55395971 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU822143
actgcatccagtttgctaagtagagtgttggaagcaattttgtagatgacatcgccaaaatcgaggatcggtaggatattcagttttactagggtaagtttggcggcgtgagtgaagggggctttgttgcggaatagaaagccgactctagatttgattttcgattggagatgtttgatatgagtctggaaggagagtttacagtctagccagacacctaggtacttatagatgtccacatattcaaggtcggaaccatccagggtggtgatgctagtcaggcgtgcgggtgcaggcagcgaacggttgaaaagcatgtatttggttttactagcgtttaagagcagttggaggccacggaaggagtgttgtatggcattgaagctcgtttggaggttagatagcacagagtccaagga

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU822143 True 419 lncRNA 0.46 1 55395553 55395971

Neighbor

gene id symbol gene type direction distance location
e2f5 LOC106568921 coding upstream 91079 55299130 ~ 55304474 (+)
lrrcc1 lrrcc1 coding upstream 102309 55270257 ~ 55293244 (+)
LOC110530158 LOC106568923 coding upstream 134480 55223558 ~ 55261073 (+)
otol1a LOC106569022 coding upstream 205297 55184427 ~ 55190256 (+)
LOC110530153 LOC106568927 coding upstream 258915 55120291 ~ 55136638 (+)
LOC110530939 LOC106568914 coding downstream 61899 55457870 ~ 55461071 (+)
cox-2 cox-2 coding downstream 83589 55479560 ~ 55484248 (+)
LOC110530169 LOC106568913 coding downstream 133154 55529125 ~ 55533530 (+)
LOC118965530 NA coding downstream 152048 55548019 ~ 55550286 (+)
LOC110530940 NA coding downstream 153918 55549889 ~ 55556293 (+)
G723692 NA non-coding upstream 15142 55380167 ~ 55380411 (+)
G723650 NA non-coding upstream 57966 55335616 ~ 55337587 (+)
G723662 NA non-coding upstream 63086 55313932 ~ 55332467 (+)
G723604 NA non-coding upstream 191764 55202865 ~ 55203789 (+)
G723704 NA non-coding downstream 4076 55400047 ~ 55400268 (+)
G723705 NA non-coding downstream 8692 55404663 ~ 55404943 (+)
G723710 NA non-coding downstream 19312 55415283 ~ 55415563 (+)
G723711 NA non-coding downstream 20665 55416636 ~ 55416889 (+)
G723712 NA non-coding downstream 20961 55416932 ~ 55417311 (+)
LOC118965528 LOC106568937 other upstream 725439 54557953 ~ 54670115 (+)
rps28 NA other upstream 1467594 53926018 ~ 53927959 (+)
mrpl34 mrpl34 other upstream 1723694 53670348 ~ 53674103 (+)
G721689 LOC106583873 other upstream 2017848 53377232 ~ 53377705 (+)
si:ch211-267e7.3 LOC106568906 other downstream 314269 55710156 ~ 55724271 (+)
G725573 NA other downstream 1587599 56983570 ~ 56984285 (+)
LOC110530213 LOC106568871 other downstream 2072901 57421244 ~ 57478855 (+)
G725878 NA other downstream 2117635 57513606 ~ 57515394 (+)

Expression


Co-expression Network