G723712


Basic Information

Item Value
gene id G723712
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 55416932 ~ 55417311 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU822155
TAGATGCATACCCTCACCATCACTACATCCTTGAGCAGCCAGAGCTAAACACAAACCTCAGCACAACTCCCATTCTATACCTGTCTCCCTGGAGTGCGTACTCTTTTACTTCACATCATGGGTTTAGAAGCTTTGGATTGGCTTTGGCAAGCATGGACACATTTTCACACAAGTGAGATTTTCACACAATTCAGTCCTTTTTACAGTAAATCCACGAGGAGGAATATAACTAGTGCACGCTTTGGGGAGAATGCATTTGGTCAGAAAGTGTGCCAGATATGTAGTgctactaacacactggaggagcaCTGGTGAAGGGCAGGGCAGTGGAGACCGTGGTGCTGGGTCTGGttgcagtagtagtggtggtggtggaggta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU822155 True 380 lncRNA 0.47 1 55416932 55417311

Neighbor

gene id symbol gene type direction distance location
si:ch211-106h4.9 LOC106568916 coding upstream 1717 55334832 ~ 55415215 (+)
e2f5 LOC106568921 coding upstream 112458 55299130 ~ 55304474 (+)
lrrcc1 lrrcc1 coding upstream 123688 55270257 ~ 55293244 (+)
LOC110530158 LOC106568923 coding upstream 155859 55223558 ~ 55261073 (+)
otol1a LOC106569022 coding upstream 226676 55184427 ~ 55190256 (+)
LOC110530939 LOC106568914 coding downstream 40559 55457870 ~ 55461071 (+)
cox-2 cox-2 coding downstream 62249 55479560 ~ 55484248 (+)
LOC110530169 LOC106568913 coding downstream 111814 55529125 ~ 55533530 (+)
LOC118965530 NA coding downstream 130708 55548019 ~ 55550286 (+)
LOC110530940 NA coding downstream 132578 55549889 ~ 55556293 (+)
G723711 NA non-coding upstream 43 55416636 ~ 55416889 (+)
G723710 NA non-coding upstream 1369 55415283 ~ 55415563 (+)
G723705 NA non-coding upstream 11989 55404663 ~ 55404943 (+)
G723704 NA non-coding upstream 16664 55400047 ~ 55400268 (+)
G723700 NA non-coding upstream 20961 55395553 ~ 55395971 (+)
G723714 NA non-coding downstream 2670 55419981 ~ 55420215 (+)
G723715 NA non-coding downstream 5180 55422491 ~ 55422690 (+)
G723748 NA non-coding downstream 43895 55461206 ~ 55462129 (+)
G723747 NA non-coding downstream 49913 55467224 ~ 55468040 (+)
G724027 NA non-coding downstream 86314 55503625 ~ 55503941 (+)
LOC110530153 LOC106568927 other upstream 280301 55120291 ~ 55136638 (+)
LOC118965528 LOC106568937 other upstream 746818 54557953 ~ 54670115 (+)
rps28 NA other upstream 1488973 53926018 ~ 53927959 (+)
mrpl34 mrpl34 other upstream 1745073 53670348 ~ 53674103 (+)
G721689 LOC106583873 other upstream 2039227 53377232 ~ 53377705 (+)
si:ch211-267e7.3 LOC106568906 other downstream 292929 55710156 ~ 55724271 (+)
G725573 NA other downstream 1566259 56983570 ~ 56984285 (+)
LOC110530213 LOC106568871 other downstream 2051561 57421244 ~ 57478855 (+)
G725878 NA other downstream 2096295 57513606 ~ 57515394 (+)

Expression


Co-expression Network