G723715


Basic Information

Item Value
gene id G723715
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 55422491 ~ 55422690 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU822158
GTAGCTGATTAGTATTAGTTGCagcaaacatttattttacaatctGCAATGTTTGAATTTCCAAATTGAATTACTGAACAAGTAATTACATCATTGCCACCAGCCAGCAGTCTAAATATGACAGCATTGAAACACCATGTATAGCTTTGTGAAATAGGCTTAATGAAAATGATGAACAAATAGGCCTACCAATAAACATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU822158 True 200 lncRNA 0.33 1 55422491 55422690

Neighbor

gene id symbol gene type direction distance location
si:ch211-106h4.9 LOC106568916 coding upstream 7276 55334832 ~ 55415215 (+)
e2f5 LOC106568921 coding upstream 118017 55299130 ~ 55304474 (+)
lrrcc1 lrrcc1 coding upstream 129247 55270257 ~ 55293244 (+)
LOC110530158 LOC106568923 coding upstream 161418 55223558 ~ 55261073 (+)
otol1a LOC106569022 coding upstream 232235 55184427 ~ 55190256 (+)
LOC110530939 LOC106568914 coding downstream 35180 55457870 ~ 55461071 (+)
cox-2 cox-2 coding downstream 56870 55479560 ~ 55484248 (+)
LOC110530169 LOC106568913 coding downstream 106435 55529125 ~ 55533530 (+)
LOC118965530 NA coding downstream 125329 55548019 ~ 55550286 (+)
LOC110530940 NA coding downstream 127199 55549889 ~ 55556293 (+)
G723714 NA non-coding upstream 2276 55419981 ~ 55420215 (+)
G723712 NA non-coding upstream 5180 55416932 ~ 55417311 (+)
G723711 NA non-coding upstream 5602 55416636 ~ 55416889 (+)
G723710 NA non-coding upstream 6928 55415283 ~ 55415563 (+)
G723705 NA non-coding upstream 17548 55404663 ~ 55404943 (+)
G723748 NA non-coding downstream 38516 55461206 ~ 55462129 (+)
G723747 NA non-coding downstream 44534 55467224 ~ 55468040 (+)
G724027 NA non-coding downstream 80935 55503625 ~ 55503941 (+)
G724030 NA non-coding downstream 81761 55504451 ~ 55504662 (+)
G724034 NA non-coding downstream 84416 55507106 ~ 55507332 (+)
LOC110530153 LOC106568927 other upstream 285860 55120291 ~ 55136638 (+)
LOC118965528 LOC106568937 other upstream 752377 54557953 ~ 54670115 (+)
rps28 NA other upstream 1494532 53926018 ~ 53927959 (+)
mrpl34 mrpl34 other upstream 1750632 53670348 ~ 53674103 (+)
G721689 LOC106583873 other upstream 2044786 53377232 ~ 53377705 (+)
si:ch211-267e7.3 LOC106568906 other downstream 287550 55710156 ~ 55724271 (+)
G725573 NA other downstream 1560880 56983570 ~ 56984285 (+)
LOC110530213 LOC106568871 other downstream 2046182 57421244 ~ 57478855 (+)
G725878 NA other downstream 2090916 57513606 ~ 57515394 (+)

Expression


Co-expression Network