G723747


Basic Information

Item Value
gene id G723747
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 55467224 ~ 55468040 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU822190
AACATTTTGGTTTTTGGTGTTGATTGGAGGATTCTTCAGCACAGCCTGCAGCGCTTCCATCAGGTTGCCTTGTCTGATCAGCGAATCCACTTCTGCTTCATCTGGACCGACCTGACTCTCTCCATTATCCTCATCATCCACAAATTTGTTCTCGTCGTACTCGTCAACGTCCACCTTCCTGAATTGGTTCGAATCAGTATTTTTCGACATTTTGACGATATGGTTTGTTGTTTAAAGAAGAATACTGCAATAGGTCTGTGCTCCTTTTACAGTAAAATAATTCCTGGTTTAATTTCCTGTCTCGCACTGACAGCTTCACTTCCG

Function

NR:

description
actin-related protein 2/3 complex subunit 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU822190 True 324 lncRNA 0.43 2 55467224 55468040

Neighbor

gene id symbol gene type direction distance location
LOC110530939 LOC106568914 coding upstream 6153 55457870 ~ 55461071 (+)
si:ch211-106h4.9 LOC106568916 coding upstream 52009 55334832 ~ 55415215 (+)
e2f5 LOC106568921 coding upstream 162750 55299130 ~ 55304474 (+)
lrrcc1 lrrcc1 coding upstream 173980 55270257 ~ 55293244 (+)
LOC110530158 LOC106568923 coding upstream 206151 55223558 ~ 55261073 (+)
cox-2 cox-2 coding downstream 11520 55479560 ~ 55484248 (+)
LOC110530169 LOC106568913 coding downstream 61085 55529125 ~ 55533530 (+)
LOC118965530 NA coding downstream 79979 55548019 ~ 55550286 (+)
LOC110530940 NA coding downstream 81849 55549889 ~ 55556293 (+)
LOC110530941 LOC106568999 coding downstream 157931 55625971 ~ 55630214 (+)
G723748 NA non-coding upstream 5095 55461206 ~ 55462129 (+)
G723715 NA non-coding upstream 44534 55422491 ~ 55422690 (+)
G723714 NA non-coding upstream 47009 55419981 ~ 55420215 (+)
G723712 NA non-coding upstream 49913 55416932 ~ 55417311 (+)
G723711 NA non-coding upstream 50335 55416636 ~ 55416889 (+)
G724027 NA non-coding downstream 35585 55503625 ~ 55503941 (+)
G724030 NA non-coding downstream 36411 55504451 ~ 55504662 (+)
G724034 NA non-coding downstream 39066 55507106 ~ 55507332 (+)
G724035 NA non-coding downstream 39490 55507530 ~ 55507761 (+)
G724046 NA non-coding downstream 44582 55512622 ~ 55512855 (+)
LOC110530153 LOC106568927 other upstream 330593 55120291 ~ 55136638 (+)
LOC118965528 LOC106568937 other upstream 797110 54557953 ~ 54670115 (+)
rps28 NA other upstream 1539265 53926018 ~ 53927959 (+)
mrpl34 mrpl34 other upstream 1795365 53670348 ~ 53674103 (+)
si:ch211-267e7.3 LOC106568906 other downstream 242200 55710156 ~ 55724271 (+)
G725573 NA other downstream 1515530 56983570 ~ 56984285 (+)
LOC110530213 LOC106568871 other downstream 2000832 57421244 ~ 57478855 (+)
G725878 NA other downstream 2045566 57513606 ~ 57515394 (+)
G725907 LOC106581475 other downstream 2086683 57554723 ~ 57555482 (+)

Expression


Co-expression Network