G724030


Basic Information

Item Value
gene id G724030
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 55504451 ~ 55504662 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU822501
GTGCATTCAGTTCAATTAAACGTTTTCTACGTTCTCCAAAACGTTCTTGAAcagacttttatttttttattttattgtattttttacctttatttaactaggcaagcccgttaagaacaaattcttattttcaatgacggcctaggaacagtgggttaactgcctgttcaggggcagaacgacagatttttaggTACTTTAAGGTACTGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU822501 True 212 lncRNA 0.34 1 55504451 55504662

Neighbor

gene id symbol gene type direction distance location
cox-2 cox-2 coding upstream 20203 55479560 ~ 55484248 (+)
LOC110530939 LOC106568914 coding upstream 43380 55457870 ~ 55461071 (+)
si:ch211-106h4.9 LOC106568916 coding upstream 89236 55334832 ~ 55415215 (+)
e2f5 LOC106568921 coding upstream 199977 55299130 ~ 55304474 (+)
lrrcc1 lrrcc1 coding upstream 211207 55270257 ~ 55293244 (+)
LOC110530169 LOC106568913 coding downstream 24463 55529125 ~ 55533530 (+)
LOC118965530 NA coding downstream 43357 55548019 ~ 55550286 (+)
LOC110530940 NA coding downstream 45227 55549889 ~ 55556293 (+)
LOC110530941 LOC106568999 coding downstream 121309 55625971 ~ 55630214 (+)
LOC110530172 LOC106568908 coding downstream 127262 55631924 ~ 55682922 (+)
G724027 NA non-coding upstream 510 55503625 ~ 55503941 (+)
G723747 NA non-coding upstream 36411 55467224 ~ 55468040 (+)
G723748 NA non-coding upstream 42322 55461206 ~ 55462129 (+)
G723715 NA non-coding upstream 81761 55422491 ~ 55422690 (+)
G723714 NA non-coding upstream 84236 55419981 ~ 55420215 (+)
G724034 NA non-coding downstream 2444 55507106 ~ 55507332 (+)
G724035 NA non-coding downstream 2868 55507530 ~ 55507761 (+)
G724046 NA non-coding downstream 7960 55512622 ~ 55512855 (+)
G724048 NA non-coding downstream 9026 55513688 ~ 55514023 (+)
G724054 NA non-coding downstream 14409 55519071 ~ 55519290 (+)
LOC110530153 LOC106568927 other upstream 367820 55120291 ~ 55136638 (+)
LOC118965528 LOC106568937 other upstream 834337 54557953 ~ 54670115 (+)
rps28 NA other upstream 1576492 53926018 ~ 53927959 (+)
mrpl34 mrpl34 other upstream 1832592 53670348 ~ 53674103 (+)
si:ch211-267e7.3 LOC106568906 other downstream 205578 55710156 ~ 55724271 (+)
G725573 NA other downstream 1478908 56983570 ~ 56984285 (+)
LOC110530213 LOC106568871 other downstream 1964210 57421244 ~ 57478855 (+)
G725878 NA other downstream 2008944 57513606 ~ 57515394 (+)
G725907 LOC106581475 other downstream 2050061 57554723 ~ 57555482 (+)

Expression


Co-expression Network